Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Kinetic of extracellular electron transfer compartmentalization and Fe2+/Hemes regulate reaction rates in Geobacter sulfurreducens

ABSTRACT: Comparison of the proteome of Geobacter sulfurreducens grown in two conditions: medium containing 10 uM FeSO4 and medium containing ca. 1 uM FeSO4.

INSTRUMENT(S):

ORGANISM(S): Geobacter Sulfurreducens

SUBMITTER: Joern Dengjel

LAB HEAD: Joern Dengjel

PROVIDER: PXD032892 | Pride | 2022-06-28

REPOSITORIES: Pride

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	20220228_MS_PP2216_A1.raw	Raw
	20220228_MS_PP2216_A2.raw	Raw
	20220228_MS_PP2216_A3.raw	Raw
	20220228_MS_PP2216_C1.raw	Raw
	20220228_MS_PP2216_C2.raw	Raw

Items per page:

1 - 5 of 13

Similar Datasets

Protein validation of Geobacter Sulfurreducens

Project description:Protein validation of Geobacter Sulfurreducens using LC-MS/MS

2014-03-20 | PXD000854 | Pride

Geobacter sulfurreducens

Project description:Geobacter sulfurreducens Raw sequence reads

| PRJNA675673 | ENA

Geobacter sulfurreducens strain overexpressing the two-component system GsuTCS1

Project description:Gene expression in a Geobacter sulfurreducens strain overexpressing the two-component system GsuTCS1

2019-07-29 | GSE23313 | GEO

Analysis of Geobacter sulfurreducens under multiple growth conditions

Project description:This SuperSeries is composed of the following subset Series: GSE22497: Transcriptome analysis of Geobacter sulfurreducens under multiple growth conditions GSE22503: ChIP-chip of Geobacter sulfurreducens PCA with antibody against RNAP and RpoD under various conditions GSE22511: Genome-wide transcription start site determination of Geobacter sulfurreducens under multiple growth conditions Refer to individual Series

2010-06-30 | E-GEOD-22512 | biostudies-arrayexpress

Geobacter sulfurreducens

Project description:Geobacter sulfurreducens Genome sequencing and assembly

| PRJNA694193 | ENA

Geobacter sulfurreducens KN400

Project description:Geobacter sulfurreducens KN400 Genome sequencing

| PRJNA39745 | ENA

Geobacter sulfurreducens biofilm iTRAQ analysis

Project description:Geobacter sulfurreducens is a dissimilatory metal-reducing bacterium capable of forming thick electron-conducting biofilms on solid electrodes in the absence of alternative electron acceptors. The remarkable ability of such biofilms to transfer electrons, liberated from soluble organic electron donors, over long distances has attracted scientific interest as to the mechanism for this process, and technological interest for application to microbial fuel and electrolysis cells and sensors. Here, we employ comparative proteomics to identify key metabolic pathways involved in G. sulfurreducens respiration by planktonic cells versus electron-conducting biofilms, in an effort to elucidate long-range electron transfer mechanisms.

2018-02-16 | PXD002667 | Pride

Geobacter sulfurreducens and Pseudomonas aeruginosa adapted cocultures SWATH-MS

Project description:In this study we further investigate the previously observed syntrophic interaction between Geobacter sulfurreducens and Pseudomonas aeruginosa. In early coculture establishment, two genetic variants of G. sulfurreducens emerged that were strongly selected for throughout coculture evolution. Single nucleotide polymorphism (SNP) variants occurred in fabI and tetR genes of G. sulfurreducens. The tetR variants displayed upregulation of adenylate cyclase transporter, CyaE and of RND efflux pump proteins as determined through SWATH-MS proteomics.

2020-04-20 | PXD013990 | Pride

Geobacter sulfurreducens

Project description:Geobacter sulfurreducens strain overexpressing the two-component system GsuTCS1

| PRJNA131485 | ENA

Geobacter sulfurreducens grown in various conditions: gene expression and RpoN ChIP-chip

Project description:This SuperSeries is composed of the following subset Series: GSE17834: Transcriptome analysis of Geobacter sulfurreducens grown with different nitrogen sources GSE17837: ChIP-chip of Geobacter sulfurreducens PCA with antibody against RpoN under various conditions. Refer to individual Series

2010-06-28 | E-GEOD-17838 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data