Proteomics

Dataset Information

0

Comprehensive analysis of platelet glycoprotein Ibα glycosylation.


ABSTRACT: Background: Platelet glycoprotein (GP) Ibα is the major ligand-binding subunit of the GPIb-IX-V complex that binds von Willebrand Factor (VWF). GPIbα is heavily glycosylated, and its glycans have been proposed to play key roles in platelet clearance, VWF binding, and as target antigens in immune thrombocytopenia syndromes. Despite its importance in platelet biology, the glycosylation profile of GPIbα is not well characterized. Objectives: The aim of this study was to comprehensively analyze GPIbα amino acid sites of glycosylation (glycosites) and glycan structures. Methods: GPIbα ectodomain that was recombinantly expressed or that was purified from human platelets was analyzed by Western blot, mass spectrometry (MS) glycomics, and MS glycoproteomics to define glycosites and the structures of the attached glycans. Results: We identified a diverse repertoire of N- and O-glycans, including sialoglycans, Tn antigen, T antigen, and ABH blood group antigens. In the analysis of the recombinant protein, we identified 62 unique O-glycosites. In the analysis of the endogenous protein purified from platelets, we identified at least 48 unique O-glycosites and 1 N-glycosite. The GPIbα mucin domain is densely O-glycosylated. Glycosites are also located within the macroglycopeptide domain and mechanosensory domain (MSD). Conclusions: This comprehensive analysis of GPIbα glycosylation lays the foundation for further studies to determine the functional and structural roles of GPIbα glycans.

INSTRUMENT(S): Orbitrap Eclipse

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood Platelet, Platelet

DISEASE(S): Disease Free

SUBMITTER: Marie Hollenhorst  

LAB HEAD: Stacy A Malaker

PROVIDER: PXD035030 | Pride | 2023-02-09

REPOSITORIES: Pride

Similar Datasets

2023-09-11 | PXD041217 | Pride
2023-09-27 | PXD039583 | Pride
2019-06-14 | PXD010290 | Pride
2020-06-06 | GSE151854 | GEO
2020-11-03 | PXD020077 | Pride
2021-07-28 | PXD025554 | Pride
2021-11-01 | PXD027353 | Pride
2020-10-05 | PXD018506 | Pride
2021-11-03 | PXD022896 | Pride
2022-08-02 | PXD031459 | Pride