Proteomics

Dataset Information

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Bottom-up Proteomics of Saliva in Autoimmune Hepatitis and Primary Biliary Cholangitis


ABSTRACT: Autoimmune Hepatitis (AIH) and Primary Biliary Cholangitis (PBC) are autoimmune diseases that target the liver in which the immune system produces an inappropriate response to self-antigens resulting in inflammation, damage, and dysfunction of hepatic tissues. Despite progress in the understanding of the etiopathogenesis and in the diagnostic and therapeutic approach of these diseases, critical issues remain concerning the early diagnosis of affected individuals. The present study aims to detect and characterize by a gel-based bottom-up proteomic approach the acid-insoluble fraction of salivary proteome from patients affected by AIH and PBC with respect to healthy controls (HCs). The study was performed on the salivary acid-insoluble proteins after in-gel digestion starting from: i) the entire SDS-PAGE lane; ii) a portion of the SDS-PAGE at lowest molecular weight (MW

INSTRUMENT(S): LTQ Orbitrap Elite, Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Saliva

DISEASE(S): Primary Biliary Cirrhosis,Autoimmune Hepatitis

SUBMITTER: Giulia Guadalupi  

LAB HEAD: Barbara Manconi

PROVIDER: PXD039847 | Pride | 2023-10-24

REPOSITORIES: Pride

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Publications

Combined Salivary Proteome Profiling and Machine Learning Analysis Provides Insight into Molecular Signature for Autoimmune Liver Diseases Classification.

Guadalupi Giulia G   Contini Cristina C   Iavarone Federica F   Castagnola Massimo M   Messana Irene I   Faa Gavino G   Onali Simona S   Chessa Luchino L   Vitorino Rui R   Amado Francisco F   Diaz Giacomo G   Manconi Barbara B   Cabras Tiziana T   Olianas Alessandra A  

International journal of molecular sciences 20230730 15


Autoimmune hepatitis (AIH) and primary biliary cholangitis (PBC) are autoimmune liver diseases that target the liver and have a wide spectrum of presentation. A global overview of quantitative variations on the salivary proteome in presence of these two pathologies is investigated in this study. The acid-insoluble salivary fraction of AIH and PBC patients, and healthy controls (HCs), was analyzed using a gel-based bottom-up proteomic approach combined with a robust machine learning statistical a  ...[more]

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