Proteomics

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Inhibition of DNMT1 methyltransferase activity via glucose-regulated O-GlcNAcylation alters the epigenome


ABSTRACT: The DNA methyltransferase activity of DNMT1 is vital for genomic maintenance of DNA methylation. We report here that DNMT1 function is regulated by O-GlcNAcylation, a protein modification that is sensitive to glucose levels, and that elevated O-GlcNAcylation of DNMT1 from high glucose environment leads to alterations to the epigenome. Using mass spectrometry and complementary alanine mutation experiments, we identified S878 as the major residue that is O-GlcNAcylated on DNMT1. Functional studies further revealed that O-GlcNAcylation of DNMT1-S878 results in an inhibition of methyltransferase activity, resulting in a general loss of DNA methylation that is preferentially at partially methylated domains (PMDs). This loss of methylation corresponds with an increase in DNA damage and apoptosis. These results establish O-GlcNAcylation of DNMT1 as a mechanism through which the epigenome is regulated by glucose metabolism and implicates a role for glycosylation of DNMT1 in metabolic diseases characterized by hyperglycemia.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Hepatocyte

DISEASE(S): Hepatocellular Carcinoma

SUBMITTER: Heon Shin  

LAB HEAD: Dustin E Schones

PROVIDER: PXD043031 | Pride | 2023-07-26

REPOSITORIES: Pride

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Publications

Inhibition of DNMT1 methyltransferase activity via glucose-regulated <i>O</i>-GlcNAcylation alters the epigenome.

Shin Heon H   Leung Amy A   Costello Kevin R KR   Senapati Parijat P   Kato Hiroyuki H   Moore Roger E RE   Lee Michael M   Lin Dimitri D   Tang Xiaofang X   Pirrotte Patrick P   Bouman Chen Zhen Z   Schones Dustin E DE  

eLife 20230720


The DNA methyltransferase activity of DNMT1 is vital for genomic maintenance of DNA methylation. We report here that DNMT1 function is regulated by <i>O</i>-GlcNAcylation, a protein modification that is sensitive to glucose levels, and that elevated <i>O</i>-GlcNAcylation of DNMT1 from high glucose environment leads to alterations to the epigenome. Using mass spectrometry and complementary alanine mutation experiments, we identified S878 as the major residue that is <i>O</i>-GlcNAcylated on huma  ...[more]

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