Ontology highlight
ABSTRACT:
INSTRUMENT(S): timsTOF SCP
ORGANISM(S): Mycobacterium Smegmatis (strain Atcc 700084 / Mc(2)155) Corynebacterium Glutamicum Atcc 13032
SUBMITTER: Petr Halada
LAB HEAD: Petr Novak
PROVIDER: PXD047705 | Pride | 2024-03-06
REPOSITORIES: Pride
Hausnerová Viola Vaňková VV Shoman Mahmoud M Kumar Dilip D Schwarz Marek M Modrák Martin M Matějčková Jitka Jirát JJ Mikesková Eliška E Neva Silvia S Herrmannová Anna A Šiková Michaela M Halada Petr P Novotná Iva I Pajer Petr P Valášek Leoš Shivaya LS Převorovský Martin M Krásný Libor L Hnilicová Jarmila J
Nucleic acids research 20240213
Bacteria have evolved structured RNAs that can associate with RNA polymerase (RNAP). Two of them have been known so far-6S RNA and Ms1 RNA but it is unclear if any other types of RNAs binding to RNAP exist in bacteria. To identify all RNAs interacting with RNAP and the primary σ factors, we have established and performed native RIP-seq in Bacillus subtilis, Corynebacterium glutamicum, Streptomyces coelicolor, Mycobacterium smegmatis and the pathogenic Mycobacterium tuberculosis. Besides known 6S ...[more]