Proteomics

Dataset Information

0

Dynamics of wood decay under anoxia

ABSTRACT: Identification of wood-decomposing fungi and their secreted enzymes at different wood proximal depths.

INSTRUMENT(S):

ORGANISM(S): Archaea Bacteria Viruses Eukaryota (eucaryotes)

SUBMITTER: Jean ARMENGAUD  

LAB HEAD: Jean Armengaud

PROVIDER: PXD048319 | Pride | 2025-09-15

REPOSITORIES: Pride

Json Xml

Dataset's files

Source:
Action DRS
E03873_MS22-065_2019S-2.mgf Mgf
E03873_MS22-065_2019S-2.raw Raw
E03874_MS22-065_2007S-3.mgf Mgf
E03874_MS22-065_2007S-3.raw Raw
E03875_MS22-065_2007S-2.mgf Mgf
Items per page:
1 - 5 of 48
altmetric image

Publications

Basidiomycete fungi are the main decomposers of dead wood with an impact on the global carbon cycle. Their degradative mechanisms have been well-studied under aerobic conditions. Here, we study their activity in oxygen-depleted environments. We use metaproteomics in a field study to identify active wood-decomposing fungi and their enzymes at different depths from the wood surface, including in oxygen-depleted conditions. In vitro, we observe that the brown-rot fungus Fomitopsis pinicola can grow  ...[more]

Similar Datasets

Genomics wood decay metagenome
| PRJNA271949 | ENA
Transcriptomics Functional transcriptomics reveal distinct combat strategies between lineages of wood-degrading fungi with redundant wood decay mechanisms
2020-05-22 | GSE151023 | GEO
Genomics wood decay metagenome
| PRJNA319605 | ENA
Proteomics Untargeted virus identification via LC-MS/MS based proteotyping
2025-05-06 | PXD050318 | Pride
Proteomics Analysis of H. kunzii H13 under conditions that mimic the wound environment
2023-05-21 | PXD034903 | Pride
Proteomics Poplar leaf tandem mass spectrometry analyses in response to a contamination gradient of phenanthrene
2025-09-15 | PXD052639 | Pride
Proteomics Poplar root tandem mass spectrometry analyses in response to a contamination gradient of phenanthrene
2025-09-15 | PXD052621 | Pride
Proteomics Metaproteomic profiling of the intestinal microbiota of SARS-CoV-2 infected patients
2022-09-01 | PXD024990 | Pride
Proteomics Estimation of relative biomasses in microbiota
2020-05-27 | PXD015500 | Pride
Proteomics Metaproteomic profiling of the intestinal microbiota of the participants of the AGBRESA study
2023-10-24 | PXD032387 | Pride