Dataset Information

Multi-omic studies analysis reveals distinct photosynthetic responses to light stress in photosynthesis and primary metabolism to high light stress between the C4 crop maize and the C3 crop rice

ABSTRACT: To systematically dissect how HL differentially affects growth of maize and rice, we carried out time-resolved course dependent multi-omics analysstudies, includanalyzing the responses in the transcriptome, the translatome, the proteome and the metabolome withto HL- treatmented in maize and rice.

INSTRUMENT(S):

ORGANISM(S): Oryza Sativa (rice) Zea Mays (maize)

TISSUE(S): Leaf

SUBMITTER: chen cheny

LAB HEAD: Yanmei Chen

PROVIDER: PXD049035 | Pride | 2025-11-03

REPOSITORIES: Pride

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Multi-omics analysis reveals distinct responses to light stress in photosynthesis and primary metabolism between maize and rice.

Duan Fengying F Li Xia X Wei Ze Z Li Jing J Jiang Caifu C Jiao Chengzhi C Zhao Shanshan S Kong Yu Y Yan Mengxiao M Huang Jirong J Yang Jun J Chen Yanmei Y Bock Ralph R Zhou Wenbin W

Plant communications 20250819 10

High-light (HL) stress is a major environmental factor that limits crop productivity. Maize (Zea mays) and rice (Oryza sativa), two key global crops, can both grow under HL intensities but differ in photosynthetic metabolism; maize is a C<sub>4</sub> species, whereas rice is a C<sub>3</sub> species. However, the molecular mechanisms underlying their responses to HL stress remain poorly understood. To systematically dissect how HL affects maize and rice growth, we conducted time-resolved multi-om ...[more]

PMID: 40836430

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Project description:Light intensity (I) is the most dynamic and significant environmental variable affecting photosynthesis (A n), stomatal conductance (g s), transpiration (T r), and water-use efficiency (WUE). Currently, studies characterizing leaf-scale WUE-I responses are rare and key questions have not been answered. In particular, (1) What shape does the response function take? (2) Are there maximum intrinsic (WUEi; WUEi-max) and instantaneous WUE (WUEinst; WUEinst-max) at the corresponding saturation irradiances (I i-sat and I inst-sat)? This study developed WUEi-I and WUEinst-I models sharing the same non-asymptotic function with previously published A n-I and g s-I models. Observation-modeling intercomparison was conducted for field-grown plants of soybean (C3) and grain amaranth (C4) to assess the robustness of our models versus the non-rectangular hyperbola models (NH models). Both types of models can reproduce WUE-I curves well over light-limited range. However, at light-saturated range, NH models overestimated WUEi-max and WUEinst-max and cannot return I i-sat and I inst-sat due to its asymptotic function. Moreover, NH models cannot describe the down-regulation of WUE induced by high light, on which our models described well. The results showed that WUEi and WUEinst increased rapidly within low range of I, driven by uncoupled photosynthesis and stomatal responsiveness. Initial response rapidity of WUEi was higher than WUEinst because the greatest increase of A n and T r occurred at low g s. C4 species showed higher WUEi-max and WUEinst-max than C3 species-at similar I i-sat and I inst-sat. Our intercomparison highlighted larger discrepancy between WUEi-I and WUEinst-I responses in C3 than C4 species, quantitatively characterizing an important advantage of C4 photosynthetic pathway-higher A n gain but lower T r cost per unit of g s change. Our models can accurately return the wealth of key quantities defining species-specific WUE-I responses-besides A n-I and g s-I responses. The key advantage is its robustness in characterizing these entangled responses over a wide I range from light-limited to light-inhibitory light intensities, through adopting the same analytical framework and the explicit and consistent definitions on these responses. Our models are of significance for physiologists and modelers-and also for breeders screening for genotypes concurrently achieving maximized photosynthesis and optimized WUE.

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