Human CVL LC-MSMS to Elucidate Functions in Bacterial Vaginosis
Ontology highlight
ABSTRACT:
INSTRUMENT(S):
ORGANISM(S): Homo Sapiens (human)
TISSUE(S): Cervicovaginal Fluid
DISEASE(S): Bacterial Vaginosis
SUBMITTER: 
Elliot Lee
LAB HEAD: David N
PROVIDER: PXD051980 | Pride | 2025-03-07
REPOSITORIES: Pride
Dataset's files
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Publications
Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome.
Lee Elliot M EM Srinivasan Sujatha S Purvine Samuel O SO Fiedler Tina L TL Leiser Owen P OP Proll Sean C SC Minot Samuel S SS Deatherage Kaiser Brooke L BL Fredricks David N DN
mSystems 20230623 4
Metaproteomics, a method for untargeted, high-throughput identification of proteins in complex samples, provides functional information about microbial communities and can tie functions to specific taxa. Metaproteomics often generates less data than other omics techniques, but analytical workflows can be improved to increase usable data in metaproteomic outputs. Identification of peptides in the metaproteomic analysis is performed by comparing mass spectra of sample peptides to a reference datab ...[more]
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