Proteomics

Dataset Information

0

ALTERED PATTERN OF PROTEOLYSIS OF EXTRACELLULAR PROTEINS IN RHEGMATOGENOUS RETINAL DETACHMENT BY MINING OF TRYPTIC AND N-TERMINI DATASETS FROM VITREOUS HUMOR PROTEOME


ABSTRACT: Retinal detachment is a severe eye condition characterized by the detachment of the neurosensory retina from the retinal pigment epithelium and caused by retinal tears. Pars plana vitrectomy is the elective surgical procedure during which vitreous humor, a fluid which shapes the eye globe and supports mechanically the adherence of the retina to the posterior chamber of the eye, is collected. Therefore, profiling of the vitreous humor proteome of subjects diagnosed with retinal detachment is supposed to provide molecular evidence on the pathobiology of the disease and on its secondary complications, such as proliferative vitreo-retinopathy, which predispose to recurrent RD (observed in 20% of cases), a sight threatening condition. Herein, we investigated the perturbations of vitreous proteome between subjects affected by primary retinal detachment and controls by shot-gun proteomics approaches. Proteomic datasets were first analyzed and searched for global proteome changes. Thereafter, starting from the assumption that the disease could be sustained by altered proteolytic processing of structural and non-structural elements of the VH, mining of N- and C-termini was performed to uncover endogenous proteolytic events underscoring the disease condition. The search retrieved evidence of a wide repertoire of either previously characterized or uncharacterized proteolytic events. Most notably, comparison of the N- and C-termini landscape between experimental groups highlighted robust alterations in the repertoire of cleaved proteins. Further strengthened by immunoblotting studies on a select panel of proteins, the data envisage that retinal detachment is promoted or characterized, as a secondary process, by proteolytic-based alterations of structural and non-structural components involved in the regulation of immune process, proteases inhibition and most notably, angiogenesis.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Vitreous Humor

DISEASE(S): Retinal Detachment

SUBMITTER: Diego Sbardella  

LAB HEAD: M.D. Ph.D. Diego Sbardella

PROVIDER: PXD057155 | Pride | 2025-10-20

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
11_DDA_1.raw Raw
11_DDA_2.raw Raw
12_DDA_1.raw Raw
12_DDA_2.raw Raw
13_DDA_1.raw Raw
Items per page:
1 - 5 of 39
altmetric image

Publications

Altered pattern of proteolysis in rhegmatogenous retinal detachment by mining of N-termini datasets from vitreous humor proteome.

Zingale Gabriele Antonio GA   Giammaria Sara S   Pandino Irene I   Placentino Luca L   Ripandelli Guido G   Tundo Grazia Raffaella GR   Grasso Giuseppe G   Bocedi Alessio A   Bell Peter A PA   Rossi Tommaso T   Sbardella Diego D  

Scientific reports 20251014 1


Rhegmatogenous Retinal Detachment (RRD) is a severe ocular condition characterized by the detachment of the neurosensory retina from the retinal pigment epithelium and caused by retinal tears. Pars Plana Vitrectomy (PPV) is the standard surgical procedure for RRD, and is intended to remove the vitreous gel, which shapes the eye, and provides mechanical and nutritional support to the retina. The study of the vitreous proteome isolated from RRD patients may help decipher the pathobiology of the di  ...[more]

Similar Datasets

2014-08-08 | PXD000957 | Pride
2025-02-24 | PXD050611 | Pride
2020-12-18 | PXD021788 | Pride
2020-10-20 | PXD019159 | Pride
2019-09-13 | PXD009525 | Pride
2022-02-17 | PXD026816 | Pride
2024-12-03 | PXD058498 |
2023-06-30 | GSE154312 | GEO
2022-02-21 | PXD031194 | Pride
2021-11-24 | PXD029818 | Pride