Dataset Information

Protein modification by a eukaryotic-like ubiquitin-related modifier in the hyperthermophilic archaeon Saccharolobus islandicus

ABSTRACT: Three independent analyses of Urm1 conjugation sites in the proteome of S. islandicus urm1 H81R strain were conducted. The data were analyzed using MaxQuant (v.1.6.15.0), and modified peptides were identified using a stringent standard.

INSTRUMENT(S):

ORGANISM(S): Sulfolobus Islandicus Rey15a

SUBMITTER: Jingjing Cao

LAB HEAD: Li Huang

PROVIDER: PXD057602 | Pride | 2025-08-21

REPOSITORIES: Pride

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Dataset's files

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			Action	DRS
	BD021PIUb_Fr1_Slot2-31_1_6533.d.zip	Other
	BD021PIUb_Fr1_Slot2combined.zip	Other
	BD021PIUb_Fr2_Slot2-32_1_6535.d.zip	Other
	BD021PIUb_Fr3_Slot2-33_1_6537.d.zip	Other
	BD021PIUb_Fr4_Slot2-34_1_6539.d.zip	Other

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Project description:Ubiquitylation is a common post translational modification of eukaryotic proteins. Protein ubiquitylation increases in the transition from intracellular schizont to extracellular merozoite in the asexual blood stage cycle of the human malaria parasite, Plasmodium falciparum (Pf). Here, we identify specific ubiquitylation sites of protein substrates in three intracellular parasite stages and extracellular merozoites; a total of 1464 sites in 546 proteins were identified. 469 ubiquitylated proteins were identified in merozoites compared with only 160 in the preceding intracellular schizont stage, indicating a large increase in protein ubiquitylation associated with merozoite maturation. Following merozoite invasion of erythrocytes, few ubiquitylated proteins were detected in the first intracellular ring stage but as parasites matured through trophozoite to schizont stages the extent of ubiquitylation increased. We identified commonly used ubiquitylation motifs and groups of ubiquitylated proteins in specific areas of cellular function, for example merozoite pellicle proteins involved in erythrocyte invasion, exported proteins, and histones. To investigate the importance of ubiquitylation we screened ubiquitin pathway inhibitors in a parasite growth assay and identified the ubiquitin activating enzyme (UBA1 or E1) inhibitor, MLN7243 (TAK-243) to be particularly effective. This small molecule was shown to be a potent inhibitor of recombinant PfUBA1, and a structural homology model of MLN7243 bound to the parasite enzyme highlights avenues for the development of P. falciparum specific inhibitors. We constructed a genetically modified parasite with a rapamycin-inducible functional deletion of uba1; addition of either MLN7243 or rapamycin to the recombinant parasite line resulted in the same phenotype, with parasite development blocked at the schizont stage. These results indicate that the intracellular target of MLN7243 is UBA1, and this activity is essential for the final differentiation of schizonts to merozoites. The ubiquitylation of many merozoite proteins and their disappearance in ring stages are consistent with the idea that ubiquitylation leads to their destruction via the proteasome once their function is complete following invasion, which would allow amino acid recycling in the period prior to the parasite’s elaboration of a new food vacuole.

Dataset Information

Protein modification by a eukaryotic-like ubiquitin-related modifier in the hyperthermophilic archaeon Saccharolobus islandicus

Dataset's files

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