Proteomics

Dataset Information

0

TRF-22 RNA pulldown and Co-IP followed by LC-MS/MS in human cell samples


ABSTRACT: tRNA-derived fragments (tRFs) play a crucial role in tumor progression. However, whether and how tRFs regulate the immune response in esophageal squamous cell carcinoma (ESCC) and their potential clinical applications remain unclear. tRF-22 enhances myeloid-derived suppressor cells (MDSCs) infiltration via a tRF-22–hnRNPAB–TGFβ2 axis, which in turn leads to the suppression of CD8+ T cells. Targeting tRF-22 or TGFβ2 reactivates antitumor immunity and synergistically enhances the effectiveness of anti-PD1 therapy in ESCC. Patients with lower tRF-22 levels exhibit better responses to immunotherapy and longer progression-free survival in our ESCC-ICB cohort.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell

DISEASE(S): Esophagus Squamous Cell Carcinoma

SUBMITTER: Xin Qin  

LAB HEAD: Ling Pan

PROVIDER: PXD057698 | Pride | 2026-01-12

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Co-IP_FLAG-hnRNPAB.raw Raw
Co-IP_FLAG-hnRNPAB.xlsx Xlsx
Co-IP_Vector.raw Raw
Co-IP_Vector.xlsx Xlsx
RNA_Pulldown_KYSE150_tRF-22_Anti-sense.raw Raw
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Publications

tRNA-Derived Fragment tRF-22 Promotes Immunosuppression by Inhibiting HnRNPAB Ubiquitination in Esophageal Squamous Cell Carcinoma.

Pan Ling L   Qin Xin X   Gong Li L   Liu Haining H   Cheng Bo B   Wang Jing J   Hu Yajie Y   Zeng Lingxing L   Wang Yiping Y   Song Qingxu Q   Cheng Yufeng Y  

Advanced science (Weinheim, Baden-Wurttemberg, Germany) 20251027 1


Small proportions of patients with esophageal squamous cell carcinoma (ESCC) benefit from immune checkpoint blockade therapy, making it urgent to identify factors that limit its effectiveness. It is found that tRF-22, a small RNA derived from tRNA<sup>GlnCTG/TTG</sup>, promotes an immunosuppressive tumor microenvironment. High tRF-22 expression is associated with worse prognosis in ESCC. tRF-22 shapes immunosuppression by increasing polymorphonuclear myeloid-derived suppressor cells (PMN-MDSCs)  ...[more]

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