Proteomics

Dataset Information

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The phosphatases TCPTP, PTPN22, and SHP1 play unique roles in T cell phosphotyrosine maintenance and feedback regulation of the TCR


ABSTRACT: The protein tyrosine phosphatases (PTPs) TCPTP, PTPN22, and SHP1 are critical regulators of the activating phophotyrosine (pY) site on the initiating T cell kinase, LckY394, but the broader implications of these phophatases in T cell receptor (TCR) signalling and T cell biology remain unclear. By combining CRISPR/Cas9 gene editing and mass spectrometry, we evaluate the protein- and pY-level effects of TCPTP, PTPN22, and SHP1 in the Jurkat T cell model system. We find that deletion of each phosphatase corresponds to unique changes in the proteome of T cells with few large-scale changes to TCR signalling proteins. Notably, PTPN22 and SHP1 deletions have opposing effects on pY abundance globally, while TCPTP deletion modestly elevates pY levels. Finally, we show that TCPTP is indirectly involved in Erk1/2 positive feedback to the TCR. Overall, our work provides evidence for alternative functions of three T cell phosphatases long thought to be redundant.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): T Cell

DISEASE(S): Lymphoma

SUBMITTER: Arthur Salomon  

LAB HEAD: Arthur Robert Salomon

PROVIDER: PXD058624 | Pride | 2025-08-01

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
JE6_wcd_R1.raw Raw
JE6_wcd_R2.raw Raw
JE6_wcd_R3.raw Raw
JE6_wcd_R4.raw Raw
JE6_wcd_R5.raw Raw
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Publications

The phosphatases TCPTP, PTPN22, and SHP1 play unique roles in T cell phosphotyrosine maintenance and feedback regulation of the TCR.

Callahan Aurora A   Mojumdar Aisharja A   Hu Mengzhou M   Wang Amber A   Griffith Alijah A AA   Huang Nicholas N   Chua Xien Yu XY   Mroz Nick N   Puterbaugh Ryan Z RZ   Reilly Shanelle P SP   Salomon Arthur A  

Scientific reports 20250730 1


The protein tyrosine phosphatases (PTPs) TCPTP, PTPN22, and SHP1 are critical regulators of the activating phosphotyrosine (pY) site on the initiating T cell kinase, Lck<sup>Y394</sup>. Still, the broader implications of these phosphatases in T cell receptor (TCR) signalling and T cell biology remain unclear. By combining CRISPR/Cas9 gene editing and mass spectrometry, we evaluate the protein- and pY-level effects of TCPTP, PTPN22, and SHP1 in the Jurkat T cell model system. We find that deletio  ...[more]

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