Proteomics

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High Enzyme Promiscuity in Lignin Degradation Mechanisms in Rhodopseudomonas palustris CGA009


ABSTRACT: Lignin is a universal waste product of the agricultural industry and is currently seen as a potential feedstock for more sustainable manufacturing. While it is the second most abundant biopolymer in the world, most of it is currently burned as it is a very recalcitrant material. Many recent studies, however, have demonstrated the viability of biocatalysis to improve the value of this feedstock and convert it into more useful chemicals, such as polyhydroxybutyrate, and clean fuels like hydrogen and n-butanol. Rhodopseudomonas palustris is a gram-negative bacterium which demonstrates a plethora of desirable metabolic capabilities, including aromatic catabolism useful for lignin degradation. This study uses a multi-omics approach, including the first usage of CRISPRi in R. palustris, to investigate the lignin consumption mechanisms of R. palustris, the essentiality of redox homeostasis to lignin consumption, elucidate a potential lignin catabolic superpathway, and enable more economically viable sustainable lignin valorization processes.

INSTRUMENT(S):

ORGANISM(S): Bacteria Rhodopseudomonas Palustris

TISSUE(S): Cell Culture

SUBMITTER: Sophe Alvarez  

LAB HEAD: Sophie Alvarez

PROVIDER: PXD060837 | Pride | 2025-08-25

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20230707_MK_1.msf Msf
20230707_MK_1.raw Raw
20230707_MK_10.msf Msf
20230707_MK_10.raw Raw
20230707_MK_11.msf Msf
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Publications

High enzyme promiscuity in lignin degradation mechanisms in <i>Rhodopseudomonas palustris</i> CGA009.

Kathol Mark M   Chowdhury Niaz Bahar NB   Immethun Cheryl C   Alsiyabi Adil A   Morris Dianna D   Naldrett Michael J MJ   Saha Rajib R  

Applied and environmental microbiology 20250708 8


Lignin is a universal waste product of the agricultural industry and is currently seen as a potential feedstock for more sustainable manufacturing. While it is the second most abundant biopolymer in the world, most of it is currently burned as it is a very recalcitrant material. Many recent studies, however, have demonstrated the viability of biocatalysis to improve the value of this feedstock and convert it into more useful chemicals, such as polyhydroxybutyrate, and clean fuels like hydrogen a  ...[more]

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