Proteomics

Dataset Information

0

Steric Repulsion Counteracts ER-to-Lipid Droplet Protein Movement


ABSTRACT: Lipid droplets (LDs) are organelles with a neutral lipid core surrounded by a phospholipid monolayer continuous with the endoplasmic reticulum’s (ER) cytosolic leaflet. LDs' dynamics and function relate closely to their constantly remodeling proteome composition. Key proteins relocate from the ER to LDs, yet the mechanisms governing their movement and accumulation in LDs remain poorly understood. Here, we developed an innovative ex cellulo tool to classify ER proteins based on their affinity for LDs. We identified steric hindrance as a prime factor regulating ER-to-LD protein transfer, where proteins with higher LD affinity can effectively displace those with lower affinity from the LD surface. Consistent with this model, we observed that the differentiation of 3T3 pre-adipoc tes into adipocytes involves extensive remodeling of ER proteins targeting LDs, with Plin1—a high-affinity LD protein—becoming predominantly recruited, correlating with a reduction in the recruitment of other ER proteins. These findings highlight lateral protein-protein exclusion as a fundamental mechanism in shaping the LD proteome.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture

SUBMITTER: Bianca Esch  

LAB HEAD: Florian Fröhlich

PROVIDER: PXD064671 | Pride | 2025-09-29

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20200624_KO_ER_1.raw Raw
20200624_KO_ER_2.raw Raw
20200624_KO_ER_3.raw Raw
20200624_KO_LD_1.raw Raw
20200624_KO_LD_2.raw Raw
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Publications


Lipid droplets (LDs) are organelles with a neutral lipid core surrounded by a phospholipid monolayer, which is continuous with the cytoplasmic leaflet of the endoplasmic reticulum (ER). LD function depends on a highly dynamic LD surface proteome. Key proteins continuously exchange between the ER and LDs; however, the mechanisms governing the interorganelle movement and accumulation on the LD surface remain poorly understood. Here, we developed an ex cellulo tool introducing a classification of E  ...[more]

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