Proteomics

Dataset Information

0

In vitro host-parasite models combined with proteomics reveal cell type-specific responses of early-migrating Fasciola hepatica juveniles


ABSTRACT: The project employs two complementary in vitro models combined with quantitative proteomics to study host-parasite interactions involving Fasciola hepatica newly excysted juveniles. The single cell type (SiCT) model uses SWATH-MS to analyse interactions with mesothelial and hepatic stellate cells, while the sequential cell type (SeCT) model applies diaPASEF to study successive encounters with intestinal epithelial and mesothelial cells. Proteomic data were processed with DIA-NN and analysed through validated pipelines to characterise differential protein expression associated with distinct host cell interactions.

INSTRUMENT(S):

ORGANISM(S): Fasciola Hepatica (liver Fluke) Mus Musculus (mouse)

TISSUE(S): Juvenile, Hepatic Stellate Cell, Mesothelial Cell, Cell Culture, Intestinal Epithelial Cell

DISEASE(S): Fascioliasis

SUBMITTER: Marta López-García  

LAB HEAD: Mar Siles

PROVIDER: PXD066004 | Pride | 2026-03-02

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
FileReport.xlsx Xlsx
README.txt Txt
SWATH_MS_raw.zip Other
SeCT_allSamples.gg_matrix.tsv Tabular
SeCT_allSamples.pg_matrix.tsv Tabular
Items per page:
1 - 5 of 29

Similar Datasets

2022-08-31 | PXD033945 | Pride
| PRJNA776863 | ENA
2019-04-30 | PXD011991 | Pride
2020-07-31 | PXD017848 | Pride
2024-10-18 | GSE279206 | GEO
2024-01-26 | PXD045488 | Pride
2024-06-26 | GSE242951 | GEO
2015-10-02 | GSE66490 | GEO
2022-09-20 | PXD033952 | Pride
2022-09-13 | PXD018996 | Pride