Proteomics

Dataset Information

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Membrane proteome profile of MSI-tumor organoids exposed to conditioned media of MSI and MSS-tumor organoids


ABSTRACT: MSI-tumor organoids were previously stimulated with 200 ng/mL IFNγ for 24 hours. Then, organoids were dissociated into single cells using TrypLE express and resuspended in conditioned media. Cells were seeded in a 24-well plate and incubated for 24 hours at 37°C. After incubation, tumor cells were collected, washed in PBS and processed for membrane protein extraction using the Mem-PER™ Plus Membrane Protein Extraction Kit (Thermo Scientific, cat. no. 89842), following the manufacturer’s instructions. Membrane proteome was quantified using the Pierce™ BCA Protein Assay Kits (Thermo Scientific, cat. no. 23225). Then, the membrane protein fraction was digested for LCMSMS analysis.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Colon

DISEASE(S): Colon Cancer

SUBMITTER: vittoria matafora  

LAB HEAD: angela bachi

PROVIDER: PXD066343 | Pride | 2026-05-07

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Parameters.txt Txt
SAMPLES_ID.xlsx Xlsx
VM_11_1.raw Raw
VM_11_11_1.raw Raw
VM_11_11_2.raw Raw
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