Proteomics

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Neuroinflammatory Stress Preferentially Impacts Synaptic MAPK Signaling and Mitochondria in Excitatory Neurons


ABSTRACT: In this study, we have applied cell type-specific in vivo biotinylation of proteins (CIBOP) to label Camk2a excitatory neuronal proteomes, and imposed differential centrifugation to prepare synaptosome-enriched fractions, followed by proteomic analysis of biotinylated neuronal proteins. This approach allowed us to obtain the native-state proteome of crude synaptosomes containing presynaptic (mitochondria and synaptic vesicles) and postsynaptic compartments of excitatory neurons from mouse brain, while directly contrasting them with the whole neuronal proteome. Next, we used the systemic LPS-induced neuroinflammation model to activate microglia in an AD-relevant manner, and examined how the synaptic compartment of excitatory neurons responds to neuroinflammatory stress, in contrast with the somatodendritic compartment. We observed that the effects of neuroinflammation on the synaptic compartment were indeed distinct from the somatodendritic compartment, suggestive of compartment-specific effects of neuroinflammation.

INSTRUMENT(S):

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Brain, Excitatory Synapse

DISEASE(S): Alzheimer's Disease

SUBMITTER: UPASNA SRIVASTAVA  

LAB HEAD: UPASNA SRIVASTAVA

PROVIDER: PXD068874 | Pride | 2026-04-13

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Oxidation.M.Sites.txt Txt
allPeptides.txt Txt
checksum.txt Txt
claudia_56samples_01.raw Raw
claudia_56samples_02.raw Raw
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Publications


<h4>Background</h4>Understanding synapse-specific effects of neuroinflammation can provide mechanistic and therapeutically relevant insights across the spectrum of neurological diseases.<h4>Methods</h4>We applied neuron-specific proteomic biotinylation <i>in vivo</i>, differential centrifugation of brain for crude synaptosome enrichment (P2 fraction) and mass spectrometry (MS) analysis of biotinylated proteins to derive native-state proteomes of Camk2a-positive neurons and their corresponding P2  ...[more]

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