Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gastrodia kuroshimensis

ABSTRACT: Developmental flower transcriptomes of the recently evolved cleistogamous species Gastrodia kuroshimensis

PROVIDER: PRJDB10992 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR261755.fastq.gz	Fastqsanger.gz
	DRR261756.fastq.gz	Fastqsanger.gz
	DRR261757.fastq.gz	Fastqsanger.gz
	DRR261758.fastq.gz	Fastqsanger.gz
	DRR261759.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

Gastrodia takeshimensis

Project description:Developmental flower transcriptomes of the recently evolved cleistogamous species Gastrodia takeshimensis

| PRJDB10965 | ENA

Gastrodia fontinalis

Project description:Developmental flower transcriptomes of the chasmogamous species Gastrodia fontinalis that is a sister species of cleistogamous Gastrodia kuroshimensis

| PRJDB10966 | ENA

Gastrodia nipponica

Project description:Developmental flower transcriptomes of the chasmogamous species Gastrodia nipponica that is a sister species of cleistogamous Gastrodia takeshimesis

| PRJDB10993 | ENA

Project description:Developmental flower transcriptomes of two recently evolved cleistogamous species and their sister chasmogamous species in the mycoheterotrophic genus Gastrodia

| PRJDB10932 | ENA

Gastrodia elata

Project description:Gastrodia elata transcriptomes

| PRJNA1058471 | ENA

Camparision of gene expression among CL, INT, and CH flowers of C. kokaiensis in ATH1

2008-05-27 | GSE9799 | GEO

Transcription profiling of C. kokaiensis CL, INT, and CH flowers on an Arabidopsis array

Project description:The annual cleistogamous herb Cardamine kokaiensis is an endemic plant along the Kokai River in Japan. We examined the differences in gene expression patterns among cleistogamous (CL), intermediate (INT), and chasmogamous (CH) flower by cross-species microarray analysis using an Arabidopsis thaliana Affymetrix high-density oligonucleotide microarray (GeneChip ATH1). We then discuss the molecular basis of the evolution of cleistogamy. Our results help to clarify the molecular basis of the evolution of plant mating systems that depend on environmental conditions. CITATION: Ecogenomics of cleistogamous and chasmogamous flowering: genome-wide gene expression patterns from cross-species microarray analysis in Cardamine kokaiensis (Brassicaceae); Journal of Ecology 2008; Shin-Ichi Morinaga, Atsushi J. Nagano, Saori Miyazaki, Minoru Kubo, Taku Demura, Hiroo Fukuda, Satoki Sakai, Mitsuyasu Hasebe Experiment Overall Design: gDNA hybridyzation data was used to calibration of cross-species microarray using Affymetrix ATH1. CH, INT, and CL flowers of C. kokaiensis were induced the chilling treatment before germination for 14 days or after germination for 14 or 28 days, respectively. We performed two biological replications per flower. Data analysis was conducted according to Hammond et al. (2005) that described the methods of calibration by gDNA hybridization.

2008-06-18 | E-GEOD-9799 | biostudies-arrayexpress

Gastrodia elata cultivar:Gastrodia elata BI.f.elata, Gastrodia elata BI.f.pilifera, Gastrodia elata BI.f.viridis and a hybrid Gastrodia elata from cross of Gastrodia elata BI.f.elata, Gastrodia elata BI.f.pilifera

Project description:Gastrodia elata cultivar:Gastrodia elata BI.f.elata, Gastrodia elata BI.f.pilifera, Gastrodia elata BI.f.viridis and a hybrid Gastrodia elata from cross of Gastrodia elata BI.f.elata, Gastrodia elata BI.f.pilifera Raw sequence reads

| PRJNA473924 | ENA

Gastrodia elata cultivar:Gastrodia elata Bl.

Project description:Gastrodia elata cultivar:Gastrodia elata Bl. Raw sequence reads

| PRJNA398298 | ENA

Gastrodia menghaiensis

Project description:Gastrodia menghaiensis overview

| PRJNA882176 | ENA