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Salvia hispanica

ABSTRACT: Genome sequencing of the oilseed crop chia (Salvia hispanica)

PROVIDER: PRJDB12688 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR333411.fastq.gz	Fastqsanger.gz
	DRR333412.fastq.gz	Fastqsanger.gz
	DRR333413.fastq.gz	Fastqsanger.gz
	DRR333414.fastq.gz	Fastqsanger.gz
	DRR333415.fastq.gz	Fastqsanger.gz

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Unraveling Genotypic Proteomic Shifts in Salvia hispanica Seeds Exposed to Accelerated Aging

Project description:This Project investigates the impact of elevated temperatures and relative humidity on the aging process of chia seeds (Salvia hispanica L.). The study employs proteomics to examine molecular responses to accelerated aging in two chia genotypes. The results underscore the importance of evaluating changes in proteins of aged seeds to gain insights into the biological mechanisms responsible for maintaining chia seed integrity during the aging process.

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Project description:We developed Chromatin Interaction Analysis by Paired-End Tag sequencing (ChIA-PET) for de novo detection of global chromatin interactions, and comprehensively mapped the chromatin interaction network bound by estrogen receptor α (ERα) in the human genome. We performed 454 and Illumina sequencing analyses. Keywords: Epigenetics Using 454, we examined 3 libraries: IHM001 (Estrogen Receptor ChIA-PET), IHM043 (Estrogen Receptor ChIP-PET) and IHM062 (IgG ChIA-PET) Using Illumina, we examined 4 libraries: IHM001 (Estrogen Receptor ChIA-PET replicate 1, Paired End Sequencing), IHH015 (Estrogen Receptor ChIA-PET replicate 2, Paired End Sequencing), H3K4me3 ChIP-Seq and RNA polymerase II ChIP-Seq

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