Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Xenopus laevis

ABSTRACT: RNA-seq of the side population in the regenerating X. laevis tadpole tails

PROVIDER: PRJDB13565 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR374828_1.fastq.gz	Fastqsanger.gz
	DRR374828_2.fastq.gz	Fastqsanger.gz
	DRR374829_1.fastq.gz	Fastqsanger.gz
	DRR374829_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Xenopus laevis

Project description:Single cell RNA-seq of the Side Population of Xenopus laevis tadpole regeneration bud

| PRJDB13081 | ENA

Xenopus laevis

Project description:Single cell RNA-seq of tail tip, tail stump and regenerating tails of Xenopus laevis tadpoles

| PRJDB8978 | ENA

Thyroid hormone induced resorption of tail in Xenopus laevis tadpole

Project description:Premetamorphic Xenopus laevis tadpole tail respond to thyroid hormone by resorption. The goal of this experiment is to identify the genes involved in the TH-induced resorption tadpole tail and compare it to TH-induced proliferation and differentiation program in tadpole limb and brain. Xenopus tadpoles (NF54) were treated with 100 nM T3 in 0.1 x MMR for another 24h and 48h or without T3 for 48h (control group). NF 61 tadpoles were in 0.1 X MMR till they reached NF stage 62. The tails were dissected after the experiment. Keywords: development or differentiation design,organism part comparison design,reference design,replicate design,time series design

2005-10-04 | GSE3405 | GEO

Xenopus laevis

Project description:RNA-seq of regenerating tails of il11ra.L knocked-down tadpoles

| PRJDB12540 | ENA

Xenopus laevis

Project description:RNA-seq of regenerating tails of x25789 knocked-down tadpoles

| PRJDB14789 | ENA

Transcription profiling of brains, hindlimbs and tails of Xenopus laevis tadpoles after treatment with thyroid hormone

Project description:Premetamorphic Xenopus laevis tadpole tail respond to thyroid hormone by resorption. The goal of this experiment is to identify the genes involved in the TH-induced resorption tadpole tail and compare it to TH-induced proliferation and differentiation program in tadpole limb and brain. Xenopus tadpoles (NF54) were treated with 100 nM T3(triioodthyronine) in 0.1 x MMR for another 24h and 48h or without T3 for 48h (control group). NF 61 tadpoles were in 0.1 X MMR till they reached NF stage 62. The tails were dissected after the experiment.

2006-11-08 | E-MNIA-94 | biostudies-arrayexpress

Xenopus laevis

Project description:Transcriptome analysis and H3K27ac Chip-seq analysis of Xenopus laevis regenerating nephric tubule

| PRJDB13124 | ENA

RNA-Seq of Xenopus laevis Retina after Crispr-mediated Rhodopsin depletion

Project description:In Xenopus laevis knocking out rhodopsin genes by crispr/Cas9 is a model of Retinitis pigmentosa. In late tadpole (permissive stages), glial Muller cells proliferate to support a regeneration response in the retina. However in early tadpole (refractory stages) the proliferative response is absent and Muller cells remain quiescent. To identify features that support Muller cells proliferation upon retinal injury we devised an experiment comparing permissive and refractory stages retina in control and Rhodopsin-crispant embryos.

2025-02-02 | E-MTAB-13881 | biostudies-arrayexpress

Thyroid hormone induced changes in Xenopus laevis tadpole brain

Project description:Premetamorphic Xenopus laevis tadpoles brain ventricle cells respond to thyroid hormone by proliferation and subsequent differentiation. The goal of this experiment is to identify the genes involved in the TH-induced proliferation pathway in tadpole brain and compare it to TH-induced proliferation and differentiation program in tadpole limb. Xenopus tadpoles (NF54) were treated with 1 mM methimazole in 0.1 X MMR solution for 1 week to block the endogenous TH production and reduce the TH present in the system of the tadpole. They were then treated with 100 nM T3 in 1 mM methimazole and 0.1 x MMR for another 24h and 48h or without T3 for 48h (control group). Brains from the tadpoles were dissected at the end of the experiment. Keywords: development or differentiation design,organism part comparison design,reference design,replicate design,time series design

2005-10-04 | GSE3402 | GEO

Xenopus laevis

Project description:Xenopus laevis RNA-Seq on animal caps

| PRJNA325078 | ENA