Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

White spot syndrome virus

ABSTRACT: Genome sequences of white spot syndrome virus derived from wild and farmed crustaceans in Japan

PROVIDER: PRJDB13885 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR420897_1.fastq.gz	Fastqsanger.gz
	DRR420897_2.fastq.gz	Fastqsanger.gz
	DRR420898_1.fastq.gz	Fastqsanger.gz
	DRR420898_2.fastq.gz	Fastqsanger.gz
	DRR420899_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 40

Similar Datasets

Whispovirus xiabaidian

Project description:White spot syndrome virus 1

| PRJNA16996 | ENA

Whispovirus xiabaidian

Project description:White Spot Syndrome Virus genome sequencing

| PRJNA200276 | ENA

Single cell transcriptome sequencing of hemocytes of mud crab (Scylla paramamosain) before and after WSSV infection

Project description:We used the BDA DNBelabC4 platform to conduct single-cell RNA transcriptome sequencing on hemocytes before and after infection with WSSV, and to study the changes in hemocytes composition and antiviral mechanism of a crustacean virus infection represented by mud crab. The blood cells, or hemocytes, of the mud crab (Scylla paramamosain) play crucial roles in its innate immune system. These cells are involved in various immune responses, including phagocytosis, encapsulation, and the production of antimicrobial peptides. The hemocytes can be isolated and characterized using techniques such as flow cytometry, which helps in understanding their functions and interactions within the crab's immune system. White Spot Syndrome Virus (WSSV) is a highly contagious and lethal virus that primarily infects crustaceans, particularly shrimp and crabs. It is an enveloped double-stranded DNA virus, typically oval-shaped, measuring about 320nm in length and 100nm in width, making it one of the largest known viruses. WSSV is the causative agent of White Spot Syndrome, a disease that has caused significant economic losses in the aquaculture industry.

2026-01-12 | GSE289112 | GEO

Whispovirus xiabaidian

Project description:Whispovirus xiabaidian Genome sequencing

| PRJNA1240903 | ENA

Whispovirus xiabaidian

Project description:Whispovirus xiabaidian Genome sequencing and assembly

| PRJNA300710 | ENA

Molecular immune response of the American lobster (Homarus americanus) to the White Spot Syndrome Virus

Project description:Transcriptomic profiling of Homarus americanus after in vivo challenge with White Spot Syndrome Virus

2013-12-31 | GSE45742 | GEO

Profiling of WSSV infection in hepatopancreas of shrimp

Project description:Profiles of gene expression in hepatopancreas isolated from shrimp experimentally infected with White Spot Syndrome Virus were compared to those of un-infected controls Keywords: response to viral disease Two groups of eight shrimp were compared in terms of hepatopancreas gene expression, 40 hours after challenge with White Spot Syndrome Virus

2010-07-01 | E-GEOD-4955 | biostudies-arrayexpress

Comparing the transcriptomic and metabolomic responses of Scylla paramamosain and Tachypleus tridentatus to White Spot Syndrome Virus.

Project description:<p>Comparing the transcriptomic and metabolomic responses of Scylla paramamosain and Tachypleus tridentatus to White Spot Syndrome Virus.</p>

2026-03-25 | MTBLS14140 | MetaboLights

Profiling of WSSV infection in hepatopancreas of shrimp

2006-06-01 | GSE4955 | GEO

Project description:Shrimp hemocytes after infection of white spot syndrome virus

| PRJNA503269 | ENA