Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Prokaryote coculture

ABSTRACT: Oral simulator

PROVIDER: PRJDB14784 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR420819_1.fastq.gz	Fastqsanger.gz
	DRR420819_2.fastq.gz	Fastqsanger.gz
	DRR420820_1.fastq.gz	Fastqsanger.gz
	DRR420820_2.fastq.gz	Fastqsanger.gz
	DRR420821_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 120

Similar Datasets

prokaryote coculture

Project description:Gut simulator

| PRJDB17564 | ENA

prokaryote coculture

Project description:prokaryote coculture overview

| PRJNA1028757 | ENA

prokaryote coculture

Project description:Lot-to-lot variation in the microbiota during the brewing process of the kimoto-style Japanese rice wine

| PRJDB16744 | ENA

E-GEOD-30784

Project description:Gene expression profile of OSCC, oral dysplasia, and normal oral tissue

2025-01-24 | E-GEOD-30784 | ExpressionAtlas

E-GEOD-38616

Project description:Transcription profiling of primary oral mucosa from oral lichen planus patients and healthy individuals

2025-01-24 | E-GEOD-38616 | ExpressionAtlas

human saliva stress - Mixed Disorder As Reaction To Stress

Project description:Saliva samples were collected 24 hours prior to and no more than 20 minutes after modular egress training simulator (stressor).

2009-12-01 | PRD000164 | Pride

EDES1.0 Eindhoven Diabetes Simulator

Project description:First version (1.0) of the Eindhoven Diabetes Simulator (EDES) model, describing postprandial glucose and insulin dynamics for a healthy human. Model can also be used to simulate insulin resistance (pre-diabetes, Metabolic Syndrome) and Type 2 Diabetes Mellitus (T2DM). Next to simulating a meal, the model can simulate oral glucose tolerance tests (OGTT's).

2024-07-11 | MODEL2403070001 | BioModels

Satellites in the prokaryote world.

Project description:BackgroundSatellites or tandem repeats are very abundant in many eukaryotic genomes. Occasionally they have been reported to be present in some prokaryotes, but to our knowledge there is no general comparative study on their occurrence. For this reason we present here an overview of the distribution and properties of satellites in a set of representative species. Our results provide novel insights into the evolutionary relationship between eukaryotes, Archaea and Bacteria.ResultsWe have searched all possible satellites present in the NCBI reference group of genomes in Archaea (142 species) and in Bacteria (119 species), detecting 2735 satellites in Archaea and 1067 in Bacteria. We have found that the distribution of satellites is very variable in different organisms. The archaeal Methanosarcina class stands out for the large amount of satellites in their genomes. Satellites from a few species have similar characteristics to those in eukaryotes, but most species have very few satellites: only 21 species in Archaea and 18 in Bacteria have more than 4 satellites/Mb. The distribution of satellites in these species is reminiscent of what is found in eukaryotes, but we find two significant differences: most satellites have a short length and many of them correspond to segments of genes coding for amino acid repeats. Transposition of non-coding satellites throughout the genome occurs rarely: only in the bacteria Leptospira interrogans and the archaea Methanocella conradii we have detected satellite families of transposed satellites with long repeats.ConclusionsOur results demonstrate that the presence of satellites in the genome is not an exclusive feature of eukaryotes. We have described a few prokaryotes which do contain satellites. We present a discussion on their eventual evolutionary significance.

| S-EPMC6749651 | biostudies-literature