Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sludge metagenome

ABSTRACT: Bioaugmentation with marine sediment-derived consortia in mesophilic anaerobic digestion under high ammonium or salinity condition

PROVIDER: PRJDB15076 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR428520_1.fastq.gz	Fastqsanger.gz
	DRR428520_2.fastq.gz	Fastqsanger.gz
	DRR428521_1.fastq.gz	Fastqsanger.gz
	DRR428521_2.fastq.gz	Fastqsanger.gz
	DRR428522_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 38

Similar Datasets

bioreactor sludge metagenome

Project description:Sludge in Mesophilic Anaerobic Digestion Genome sequencing

| PRJNA253784 | ENA

sludge metagenome

Project description:Identification of key steps and associated microbial populations for efficient anaerobic digestion under high ammonium and salinity conditions

| PRJDB13063 | ENA

Differences in Shewanella algae C6G3 transcriptomes according to nature of electron acceptor (MnIV/NO3)

Project description:Shewanella algae C6G3 can conduct dissimilative nitrate reduction into ammonium and MnIV reduction. This bacteria have the unusual ability to produce anaerobically nitrite from ammonium in the presence of MnIV. This property may explain NO2/3- accumulation observed in some anaerobic zones of marine sediments. To gain insight into their metabolic capabilities, global mRNA expression patterns were investigated by RNA-seq and qRT-PCR in cells growing with lactate and ammonium as carbon and nitrogen sources and with MnIV or nitrate as electron acceptors. Genes exhibiting higher expression levels in the presence of MnIV belonged to functional categories of carbohydrate, coenzyme, lipid metabolisms and inorganic ion transport. Furthermore, comparative transcriptomic pattern between MnIV and NO3 revealed that the strain presented an ammonium limitation status with MnIV, despite the presence of identical and non-limiting concentration of ammonium in both culture conditions. Regulators ntrB/nrtC, ammonium channel, nitrogen regulatory protein P-II, glutamine synthetase and asparagine synthetase glutamine dependent genes were over-expressed. In nitrate condition, genes involved in synthesis of several amino acids were over expressed. Among the genes associated with the stress response, Kat E was highly expressed particularly under manganese condition

2018-12-31 | GSE109146 | GEO

Anaerobic digestion : bioaugmentation

Project description:Anaerobic digestion : bioaugmentation Genome sequencing

| PRJNA1206320 | ENA

anaerobic digester metagenome

Project description:Combined effects of sulfate, salinity and ammonium on anaerobic digestion microbial community

| PRJDB18911 | ENA

bioreactor sludge metagenome

Project description:Anaerobic sludge digestion

| PRJNA257129 | ENA

Project description:Efficacy of bioaugmentation with non-domesticated mixed microbial consortia under ammonia inhibition in anaerobic digestion

| PRJNA998199 | ENA