Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Unidentified

ABSTRACT: Comparative Study on Domestic Skate Species Using Genome Information (KAP220256)

PROVIDER: PRJDB19315 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR671466_1.fastq.gz	Fastqsanger.gz
	DRR671466_2.fastq.gz	Fastqsanger.gz
	DRR671467_1.fastq.gz	Fastqsanger.gz
	DRR671467_2.fastq.gz	Fastqsanger.gz
	DRR671468_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 14

Similar Datasets

unidentified

Project description:Comparative Study on Domestic Skate Species Using Genome Information (KAP220257)

| PRJDB19316 | ENA

unidentified

Project description:Comparative Study on Domestic Skate Species Using Genome Information (KAP220267)

| PRJDB19327 | ENA

unidentified

Project description:Comparative Study on Domestic Skate Species Using Genome Information (KAP220254)

| PRJDB19313 | ENA

unidentified

Project description:Comparative analysis and its application using multi-dimensional agricultural omics information (KAP220331)

| PRJDB19384 | ENA

Genome-wide screening of gene regulation of little skate motor neuron

Project description:The little skate, a cartilaginous fish evolutionarily distal from tetrapods, displays walking-like behavior and has conserved genetic programs and neuronal substrates for land-walking. Studies on little skate have been limited due to lack of high-quality genome assembly. Here, we generated an improved genome assembly of little skate reflecting precise gene annotation and structures and performed integrated analysis of gene expression and chromatin accessibility to investigate molecular mechanisms of fin motor neuron development. Through interspecies comparison of RNA expression, common and species-specific genes expressed in fin/limb/wing level motor neurons were identified. Moreover, by performing chromatin accessibility analysis with a pure fin motor neuron population the potential regulators controlling the gene expression in fin motor neurons were identified. Interspecies comparison of genomic data, gene expression, and chromatin accessibility assay suggest that the little skate has highly conserved gene regulatory mechanisms controlling tetrapod locomotion, which was not previously expected.

2022-10-24 | GSE180334 | GEO

unidentified

Project description:Wild watermelon genome assembly and comparative genomics study (KAP220283)

| PRJDB19339 | ENA

Identifying sources of tick blood meals using unidentified tandem mass spectral libraries

Project description:Rapid and reliable identification of the vertebrate species on which a disease vector previously parasitized is imperative to study ecological factors that affect pathogen distribution and can aid the development of public health programs. We here describe a proteome profiling technique designed to identify the source of blood meals of hematophagous arthropods. This method employs direct spectral matching and thus does not require a priori knowledge of any genetic or protein sequence information. Using this technology, we can detect remnants of blood in blacklegged ticks (Ixodes scapularis) and correctly determine the vertebrate species from which the blood was derived even six months after the tick had fed. This biological fingerprinting methodology is sensitive, fast, cost-effective, and can potentially be adapted for other biological and medical applications when existing genome-based methods are impractical or ineffective.

2014-04-03 | PXD000170 | Pride

unidentified

Project description:Production and assembly of Omija genome information (KAP220322)

| PRJDB19375 | ENA

unidentified

Project description:Development of molecular markers using comparative genomics (KAP220287)

| PRJDB19343 | ENA