Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Unidentified

ABSTRACT: Identification of epigenetic factors associated with useful traits and development of epigenetic molecular marker system in the Brassicaceae family (KAP220315)

PROVIDER: PRJDB19368 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR672806_1.fastq.gz	Fastqsanger.gz
	DRR672806_2.fastq.gz	Fastqsanger.gz
	DRR672807_1.fastq.gz	Fastqsanger.gz
	DRR672807_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

unidentified

Project description:Development of useful genetic markers resource (KAP220291)

| PRJDB19346 | ENA

unidentified

Project description:Genome assembly and development of useful genes (KAP220285)

| PRJDB19341 | ENA

unidentified

Project description:Discovering useful genetic resources based on multi-omics of useful microorganisms for agriculture and food and developing technology to enhance value (KAP220309)

| PRJDB19362 | ENA

Transcriptional Profiling of Psoriasis Using RNA-seq Reveals Previously Unidentified Differentially Expressed genes

Project description:The transcriptomic profiling of psoriasis has led to an increased understanding of disease pathogenesis. Although microarray technologies have been instrumental in this regard, it is clear that these tools detect an incomplete set of DEGs. RNA-seq can be used to supplement these prior technologies. Here, the use of RNAseq methods substantially increased the number of psoriasis-related DEGs. Furthermore, DEGs that were uniquely identified by RNA-seq, but not in other published microarray studies, further supported the role of IL-17 and tumor necrosis factor-a synergy in psoriasis. Examination of one of these factors at the protein level confirmed that RNA-seq is a powerful tool that can be used to identify molecular factors present in psoriasis lesions, and may be useful in the identification of therapeutic targets that to our knowledge have not been reported previously. Further studies are in progress to determine the biological significance of DEGs uniquely discovered by RNA-seq.

2012-10-22 | GSE41745 | GEO

Transcriptional Profiling of Psoriasis Using RNA-seq Reveals Previously Unidentified Differentially Expressed genes

2012-10-22 | E-GEOD-41745 | biostudies-arrayexpress

Aethionema carneum

Project description:Flowering plant of Brassicaceae family

| PRJNA294106 | ENA

unidentified

Project description:Functional microbial genome analysis of fermented foods and discovery of useful genes (KAP220300)

| PRJDB19354 | ENA

unidentified

Project description:Functional microbial genome analysis of fermented foods and discovery of useful genes (KAP220380)

| PRJDB19400 | ENA

unidentified

Project description:Analysis of mass transcripts of KCWR in forests and discovery of useful genes (KAP220511)

| PRJDB19434 | ENA

An exploratory study to evaluate molecular predictive and/or prognostic factors of benefit from a randomized, phase III trial of sequential capecitabine/5FU plus bevacizumab (Cape/5FU-Bmab) to capecitabine/5FU plus oxaliplatin plus bevacizumab (CapeOX/mFOLOFX6-Bmab) versus combination CapeOX/mFOLFOX6-Bmab in advanced colorectal cancer.

Project description:Primary outcome(s): Correlation between image evaluation/clinical data and molecular predictive and/or prognostic factors including genetic and epigenetic alterations derived from colorectal cancer tissues

| 2631489 | ecrin-mdr-crc

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data