Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gentiana scabra x Gentiana triflora

ABSTRACT: Ion Beam-Induced Mutagenesis and Genomic Analysis in Japanese Gentian

PROVIDER: PRJDB20431 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR657487_1.fastq.gz	Fastqsanger.gz
	DRR657487_2.fastq.gz	Fastqsanger.gz
	DRR657488_1.fastq.gz	Fastqsanger.gz
	DRR657488_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Gentiana scabra var. buergeri

Project description:Post-transcriptional gene silencing of chalcone synthase gene causes corolla lobe-specific whiting of Japanese gentian.

| PRJDB12351 | ENA

Gentiana triflora

Project description:Comparison of gene expression levels between different dormancy stages

| PRJDB14938 | ENA

Gentiana triflora

Project description:RNA-seq analysis for the targeting flowering in Gentiana triflora

| PRJDB13927 | ENA

Gentiana triflora

Project description:RNA-seq data of petals and leaves in Gentiana triflora

| PRJDB9616 | ENA

Gentiana triflora

Project description:Gentiana triflora overview

| PRJNA775732 | ENA

Sequencing and comparative analysis of chloroplast genomes of three medicinal plants: Gentiana manshurica, G. scabra and G. triflora.

Project description:Three species of Gentiana (Gentiana manshurica kitag., Gentiana scabra bunge., and Gentiana triflora pall.) were the main source for an important traditional Chinese medicine, "Longdan", which was first mentioned in " Shennong materia medica Sutra " 2000 years ago. Until recently, there were very few reports on taxonomic classification of these three traditional medicinal Gentiana species. In the current study, chloroplast genomes of the three Gentiana species were sequenced and the phylogenetic analyses were performed in combination with 31 NCBI downloaded Gentiana species sequences and two species of Swertia as outgroup. Based on the phylogenetic results, a new taxonomic classification for Gentiana was proposed, including 4 independent clades with 6 subdivisions (Group 1-Group 6). All the general features, SSR characteristics and gene composition of Gentiana chloroplast genomes strongly supported such a new classification system for Gentiana, which could lay a theoretical foundation for Gentiana in the molecular evolutionary research. Finally, phylogenetic analyisis also demonstrated that the three examined species from Gentiana could cluster together into one group (Group 6), which was far away from the evolutionary position of the medicinal species, Gentiana rigescens Franch, which was consistent with the traditional classification in traditional medicinal uses and taxonomy.Supplementary informationThe online version contains supplementary material available at 10.1007/s12298-022-01217-0.

| S-EPMC9424396 | biostudies-literature

Gentiana scabra

Project description:Gentiana scabra overview

| PRJNA799108 | ENA

Gentiana scabra

Project description:Reversible flower opening regulated by CPK16-dependent phosphorylation and activation of aquaporin PIP2 2 in Gentiana.

| PRJDB11519 | ENA

Nitrogen-ion-beam implantation effect on rice dry seeds

Project description:Analysis of 96-hours-old-rice seedlings with promoted-growth induced by implantation with low-energy nitrogen ion beam. Ion-beam implantation can induce changes in 351 up-regulated transcripts and 470 down-regulated transcripts, including signaling proteins, kinases, plant hormones, transposable elements, transcription factors, non-coding protein RNAs, secondary metabolites, resistance proteins, peroxidase, chromatin modification and even miRNAs. Results provide insight into the molecular basis of biological effects of plants that implanted by ion beam. Three sample groups—the controls, the ion-beam implanted samples and vacuum-treated samples. Three replicates were included in each sample group. Radiation induced gene expression rice seedlings was measured at 96 hours after germination of the seeds.

2012-03-01 | E-GEOD-36152 | biostudies-arrayexpress

Nitrogen-ion-beam implantation effect on rice dry seeds

2012-03-01 | GSE36152 | GEO