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Wastewater metagenome

ABSTRACT: Comparative evaluation of antibiotic resistome in hospital wastewater sources

PROVIDER: PRJDB20715 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR680724.fastq.gz	Fastqsanger.gz
	DRR680725.fastq.gz	Fastqsanger.gz
	DRR680726.fastq.gz	Fastqsanger.gz
	DRR680727.fastq.gz	Fastqsanger.gz
	DRR680728.fastq.gz	Fastqsanger.gz

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Project description:In this study, we exposed Caenorhabditis elegans wild types N2 to water collected from six sources in the Dutch village Sneek. The sources were: wastewater from a hospital, a community (80 households), a nursing home, influent into the local municipal wastewater treatment plant, effluent of the wastewater treatment plant, and surface water samples. The goal of the experiment was to determine if C. elegans can be used to identify pollutants in the water by transcriptional profiling. Age synchronized worms at developmental L4 larval stage were exposed to treatment for 24 hours. After flash freezing the samples, RNA was isolated, labeled and hybridized on oligo microarray (Agilent) slides.

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