Ontology highlight
ABSTRACT:
PROVIDER: PRJDB36002 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:Three different developmental stages of ray and disc flowers of gerbera hybrida were compared to each other using gerbera 9K cDNA microarray.
2005-12-31 | E-MEXP-418 | biostudies-arrayexpress
Project description:Gerbera hybrida petal transcriptome assembly
| PRJNA283352 | ENA
Project description:Different gerbera hybrida flower organs including pappus bristles, stamen, early and late petal development and flower scape, were compared to a pooled reference sample to determine which genes are abundant for analyzed flower organs. Samples were pooled and three replicants that were independently labelled were included. All labellings/hybridizations included one dye swap technical repat. Gerbera 9K cDNA microarrays were used for hybridizations.
2004-12-31 | E-MEXP-134 | biostudies-arrayexpress
Project description:Different gerbera hybrida flower organs including pappus bristles, stamen, early and late petal development and flower scape, were compared to a pooled reference sample to determine which genes are abundant for analyzed flower organs. Samples were pooled and included two biological replicants with three technical replicants that were independently labelled were included. Each biological replicant included one dye swap technical repeat. Gerbera 9K cDNA microarrays were used for hybridizations.
2004-12-31 | E-MEXP-207 | biostudies-arrayexpress
Project description:<p> The casuarina moth (Lymantria xylina) is a notorious forestry pest, posing severe ecological and economic threats due to its destructive defoliation outbreaks and high invasive potential. Despite its significance, a high-quality reference genome has been lacking, limiting molecular-level investigations into its biology and hindering the development of effective pest management strategies. In this study, we report the first chromosome-level genome assembly of L. xylina generated through a combination of illumina short-reads, Oxford Nanopore long-reads, and Hi-C scaffolding. The final assembly spans 977.74 Mb, with 95.17% anchored to 31 pseudo-chromosomes, achieving a scaffold N50 of 34.15 Mb. Importantly, telomeric sequences were identified at both ends of all 31 pseudo-chromosomes, underscoring the exceptional quality and completeness of this reference genome. Quality assessment further revealed a BUSCO completeness of 94.5% and a consensus QV of 31.72. We also annotated 18,484 protein-coding genes, 95.21% of which were functionally assigned, and characterized genome-wide repetitive elements (77.18%).</p><p> Beyond the genome assembly, we generated comprehensive RNA-seq and metabolomic datasets across multiple diapause stages, enabling insights into gene expression dynamics and metabolic regulation during egg development. Together, these resources provide a valuable foundation for studying the genetic basis of host adaptation, invasiveness, and interactions with natural enemies such as nucleopolyhedrovirus and Beauveria bassiana.</p>
2025-12-26 | MTBLS13575 | MetaboLights
Project description:Grapholita molesta chromosome-level genome assembly
| PRJNA627114 | ENA