Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Human saliva metagenome

ABSTRACT: 16S amplicon sequence analysis of saliva from patients with pediatric Primary Sclerosing Cholangitis compared with Ulcerative Colitis and healthy controls

PROVIDER: PRJDB5650 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR090047.fastq.gz	Fastqsanger.gz
	DRR090048.fastq.gz	Fastqsanger.gz
	DRR090049.fastq.gz	Fastqsanger.gz
	DRR090050.fastq.gz	Fastqsanger.gz
	DRR090051.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

Single cell sequencing of mucosal pinch biopsies from patients with ulcerative colitis and primary sclerosing cholangitis concomitant with colitis

Project description:Mucosal pinch biopsies from ascending, transverse, descending colon and rectum were obtained from ulcerative colitis (UC) and primary sclerosing cholangitis concomitant with colitis (PSC-UC) patients during routine endoscopies and subjected to 5' single-cell RNA sequencing

2026-06-17 | E-MTAB-14955 | biostudies-arrayexpress

Common functional alterations identified in blood transcriptome of autoimmune cholestatic liver and inflammatory bowel diseases

Project description:Primary biliary cholangitis (PBC), primary sclerosing cholangitis (PSC), and inflammatory bowel diseases (IBDs), including Crohn’s disease (CD) and ulcerative colitis (UC), are heterogeneous chronic autoimmune diseases that may share underlying pathogenic mechanisms. Herein, we compared simultaneously analyzed blood transcriptomes from patients with PBC, PSC, and IBD.

2019-05-01 | GSE119600 | GEO

V(D)J TCR single cell sequencing of mucosal pinch biopsies from patients with ulcerative colitis and primary sclerosing cholangitis concomitant with colitis

2026-06-17 | E-MTAB-14899 | biostudies-arrayexpress

V(D)J BCR single cell sequencing of mucosal pinch biopsies from patients with ulcerative colitis and primary sclerosing cholangitis concomitant with colitis

2026-06-17 | E-MTAB-14901 | biostudies-arrayexpress

human gut metagenome

Project description:16S amplicon sequence analysis of stools from patients with pediatric Primary Sclerosing Cholangitis compared with Ulcerative Colitis and healthy controls

| PRJDB4871 | ENA

Compare Conventional Colonosocpy to Endoscopic AFI, NBI for Dysplasia Detection for Ulcerative Colitis & Cholangitis

Project description:This study is being done to: To attempt to increase the detection of precancerous colon tissue in patients with chronic ulcerative colitis and primary sclerosing cholangitis; To determine if an investigational scope that can look at the lining of the colon in different ways will help the doctor identify abnormal tissue in patients with chronic ulcerative colitis and concurrent primary sclerosing cholangitis; and To determine if this investigational scope can accurately detect precancerous or cancerous tissue in patients with chronic ulcerative colitis that are known to have had cancerous or precancerous tissue in the past.

| 2048547 | ecrin-mdr-crc

Epigenetic array data of saliva samples in individiduals with Crohn's Disease and Ulcerative Colitis with controls

Project description:We took saliva samples from 227 people with Crohn's Disease, 75 people with Ulcerative Colitis and 250 control.

2025-05-31 | GSE232891 | GEO

human saliva metagenome

Project description:16S amplicon sequence analysis of saliva from patients with Ulcerative Colitis

| PRJDB10985 | ENA

Influence of GPR35 deficiency on the ileal and macrophage transcriptome

Project description:Mutations in GPR35 (G protein coupled receptor 35) are linked to ulcerative colitis and primary sclerosing cholangitis. How GPR35, which interacts with the Na/K-ATPase to determine ion transport, influences the transcriptome of macrophages and the ileum is unknown. Here compare transcript expression in bone marrow-derived macrophages and isolated ileum from mice deficient in GPR35 (knockout) with wild type mice by bulk RNA sequencing.

2025-02-07 | GSE252926 | GEO

Project description:Intestinal microbiome of pediatric patients with primary sclerosing cholangitis in association with ulcerative colitis

| PRJNA610934 | ENA