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Rubroshorea leprosula

ABSTRACT: RNAseq for branch development in Shorea leprosula

PROVIDER: PRJDB7974 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR168376_1.fastq.gz	Fastqsanger.gz
	DRR168376_2.fastq.gz	Fastqsanger.gz
	DRR168377_1.fastq.gz	Fastqsanger.gz
	DRR168377_2.fastq.gz	Fastqsanger.gz
	DRR168378_1.fastq.gz	Fastqsanger.gz

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To Be a Flower or Fruiting Branch: Insights Revealed by mRNA and Small RNA Transcriptomes from Different Cotton Developmental Stages

Project description:Purpose: found out the regulated genes of nulliplex-branch and its forming molecular mechanism Methods: shoot apical mRNA and miRNA in two nulliplex branch and two normal branch cotton of three development stages were generated by deep sequencing, in triplicate, using Illumina HiSeq 2000. Results: we found 3 825 and 353 specific stage differnent expressed genes in pre-budding stage of island cotton and upland cotton, respectively. In miRNA, we found 16 and 18 specific stage differnent expressed miRNA in pre-budding stageof island cotton and upland cotton, respectively. Conclusions: Our study represents the genes and miRNA control development of lateral branch and regulate flowering time at same times. Shoot apical mRNA and miRNA of normal branch cotton and nulliplex branch botton were generated by deep sequencing, in triplicate, using Illumina HiSeq 2000.

2016-03-17 | E-GEOD-69025 | biostudies-arrayexpress

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Project description:Purpose: found out the regulated genes of nulliplex-branch and its forming molecular mechanism Methods: the GhBRC1 genes of nulliplex branch and short branch cotton are silenced by VIGS, and then the shoot apical mRNA of controls and treated were sequenced, in four repeats, using Illumina HiSeq 2000. Results: we found 3519 and 17 differnent expressed genes in nulliplex-branch and short branch cotton, respectively. Conclusions: Our study represents the genes control development of lateral branch.

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