Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cyanidioschyzon merolae

ABSTRACT: Cyanidioschyzon genome re-sequencing project

PROVIDER: PRJDB9174 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	DRR217142_1.fastq.gz	Fastqsanger.gz
	DRR217142_2.fastq.gz	Fastqsanger.gz
	DRR217143_1.fastq.gz	Fastqsanger.gz
	DRR217143_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Cyanidioschyzon merolae

Project description:Genomic sequencing data of Cyanidioschyzon merolae

| PRJDB37388 | ENA

Effect of PRC2 loss of function on gene and TE expression in Cyanidioschyzon merolae

Project description:To evaluate role of PRC2 on transcriptional regulation in Cyanidioschyzon merolae, we generated loss of function mutants of a Ez homolog in Cyanidioschyzon merolae by homologous recombination based mutagenesis. Then we performed comparative transcriptome analyses using data obtained from Cme(z) and WT.

2023-09-21 | GSE221632 | GEO

Cyanidioschyzon merolae

Project description:Gene expression in cell cycle of Cyanidioschyzon merolae_1

| PRJNA101219 | ENA

Cyanidioschyzon merolae strain:Isolate 5578

Project description:Cyanidioschyzon merolae strain:Isolate 5578 Genome sequencing

| PRJNA219685 | ENA

Cyanidioschyzon merolae strain:Isolate 5508

Project description:Cyanidioschyzon merolae strain:Isolate 5508 Genome sequencing

| PRJNA219684 | ENA

Cyanidioschyzon merolae

Project description:Effect of rapamycin on the transcriptome in an inducible protein knockdown system in Cyanidioschyzon merolae

| PRJDB16885 | ENA

Cyanidioschyzon merolae strain 10D

Project description:Cyanidioschyzon merolae sequenced by whole genome shotgun method

| PRJNA10792 | ENA

Cyanidioschyzon merolae

Project description:RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae

| PRJNA327116 | ENA

Temperature induced remodeling of the photosynthetic machinery of the red alga Cyanidioschyzon merolae

Project description:Cyanidioschyzon merolae is a thermophilic red alga with an optimum growth temperature of 42°C. In this study we investigated the acclimation process of the alga to a colder temperature (25°C). To this aim we performed quantitative proteomic analyses of whole cells as well as solubilized thylakoid protein complexes.

2017-04-03 | PXD005615 | Pride

Remembering heat: How the unicellular alga Cyanidioschyzon merolae establishes a molecular stress memory that boosts its thermotolerance

Project description:A powerful way to enhance heat tolerance is by establishing a stress memory through exposure to a heat stress that is strong enough to induce a molecular stress response without causing irreversible damage, followed by a recovery phase. While this has been extensively studied in multicellular organisms, we demonstrate that heat stress memory is also present in the unicellular red alga Cyanidioschyzon merolae. We show that, similarly to more complex organisms, thermomemory in this alga is underpinned by transcriptomic reprogramming, with the chloroplast emerging as the main site of gene trainability. Additionally, we find a conserved small heat shock protein (sHSP)-encoding locus in the nuclear genome to be heat-trainable, likely by histone depletion and modification through the repressive mark H3K27me3. We show that of C. merolae’s two sHSPs, only CmsHSP2 is necessary for proper HS memory establishment, and that the two sHSPs localize to different cellular compartments during heat stress. Finally, comparative RNA-Sequencing of an Enhancer of zeste mutant reveals a role for the H3K27me3-transferase in adapting the transcriptome to recurring heat exposures, beyond regulating the trainable sHSP locus.

2026-04-05 | GSE326561 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data