Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Canine Transmissible Venereal Tumour (CTVT) Mitochondria

ABSTRACT: Low coverage whole genome sequencing of 447 CTVT tumours and 338 matched hosts

PROVIDER: PRJEB13151 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Canine mammary tumour

Project description:Genome-wide analysis identifies germ-line risk factors associated with canine mammary tumours

| PRJEB13624 | ENA

Sex disparity in oronasal presentations of canine transmissible venereal tumour.

Project description: Not available

| S-EPMC7615771 | biostudies-literature

RNA-seq of canine transmissible venereal tumour biopsies

Project description:To assess expression of mtDNA genes in the canine transmissible venereal tumour (CTVT), biopsy tissue samples from 33 CTVT cases were subjected to total RNA extraction, and stranded RNA sequencing libraries generated with the Ribo-Zero ribosomal RNA removal kit (insert size 100–300 bp) were sequenced using 75-bp paired-end sequencing reads on an Illumina HiSeq4000 instrument. Gene transcript abundance was quantified using the Salmon software (v0.8.2).

2020-04-29 | E-MTAB-9037 | biostudies-arrayexpress

The changing global distribution and prevalence of canine transmissible venereal tumour.

Project description: Not available

| S-EPMC4152766 | biostudies-literature

Methylome of 9 canine transmissible veneral tumour (CTVT) samples

Project description:The canine transmissible veneral tumour (CTVT) is one of the few known clonally transmissible cancers in nature. CTVT regresses spontaneously or after a single treatment with vincristine, however we know little of the mechanisms. To understand CTVT regression, we performed methylome analyses on serial biopsies of regressing and non-regressing CTVT, aiming to identify the likely drivers of CTVT regression.

2018-01-31 | E-MTAB-5495 | biostudies-arrayexpress

A retrospective study of canine transmissible venereal tumour in Grenada, West Indies.

Project description: Not available

| S-EPMC9122414 | biostudies-literature

Proteomic profiling of glioblastoma tumour tissue

Project description:Using HiRIEF LC-MS/MS, we analysed 10 GBM tumour tissue samples ran in one TMT10 set. The set consisted of 7 primary tumours and 3 non-matched recurrent tumours. One primary tumour was highly necrotic.

2022-12-23 | PXD027341 | Pride

Expression data from patient and primary xenografts esophageal tumour samples

Project description:Microarrays were used to assess differences between 1) human tumours that did and did not engraft, 2) human tumours and their matched primary xenografts, 3) early and late passage primary xenografts and 4) small and large primary xenografts for a series of esophageal patient and primary xenograft tumours

2015-01-11 | GSE58870 | GEO

Proteomic analysis of extracellular vesicles derived from canine mammary tumour cell lines

Project description:In this study, the proteins found in extracellular vesicles of different cells relevant in canine mammary tumours (CMTs) research were investigated to identify CMT subtype specific proteome signatures.

2024-11-07 | PXD046033 | Pride

Canine transmissible venereal tumour established in immunodeficient mice reprograms the gene expression profiles associated with a favourable tumour microenvironment to enable cancer malignancy.

Project description: Not available

| S-EPMC8722346 | biostudies-literature