Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

BRIC-seq RNAi in Drosophila

ABSTRACT: BRIC-seq RNAi in Drosophila

PROVIDER: PRJEB15335 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR1656140_1.fastq.gz	Fastqsanger.gz
	ERR1656140_2.fastq.gz	Fastqsanger.gz
	ERR1656150_1.fastq.gz	Fastqsanger.gz
	ERR1656150_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 117

Similar Datasets

RNA-Seq analysis of 9G8-RNAi intestines in Drosophila

Project description:RNA-Seq analysis of 9G8-RNAi intestines in Drosophila

| PRJNA1191482 | ENA

RNA-seq on Drosophila wing imaginal discs after Myc RNAi or overexpression

Project description:RNA-seq was performed to confirm the effect of dMyc overexpression or RNAi repression on conserved Myc targets in the Drosophila wing disc.

2022-04-26 | E-MTAB-9328 | biostudies-arrayexpress

RNA-Seq analysis of 9G8-RNAi fat bodies in Drosophila

Project description:RNA-Seq analysis of 9G8-RNAi fat bodies in Drosophila

| PRJNA785889 | ENA

Enigma (CG9006) RNAi vs control RNAi in Drosophila Kc-167 cells.

Project description:5 day RNAi treatment to knockdown Enigma, CG9006, a Drosophila mitochondrial protein with homology to acyl-CoA dehydrogenases. Keywords: Genetic modification

2006-02-04 | GSE3566 | GEO

ISWI RNAi in Drosophila SL2 cells

Project description:Profiling of changes in steady state RNA levels upon RNAi-mediated knockdown of the nucleosome remodeling ATPase ISWI in Drosophila SL2 cells. Quantitation of the corresponding proteomes has been performed to describe transcriptome-proteome relations. The analysis indicates a limited correlation of the two expression steps. Keywords: RNAi-mediated knockdown

2008-09-05 | GSE11164 | GEO

Transcriptome profiling of Drosophila wild type and ttk-RNAi, dpn overexpressed, Nicd overexpressed and seq&Nicd overexpressed intestinal progenitor cells

Project description:Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare transcriptome profiling (RNA-seq) of intestinal progenitor cells in Drosophila wild type and ttk-RNAi, dpn overexpressed, Nicd overexpressed and seq&Nicd overexpressed midguts Methods: mRNA profiles of intestinal progenitor cells isolated from 7-day-old wild-type (Ctrl) and ttk-RNAi, dpn overexpressed(dpn OE), Nicd overexpressed(Nicd OE) and seq&Nicd overexpressed(seq&Nicd OE) Drosophila midgut were generated by deep sequencing using Illumina HiSeq 2500. Results: ttk-RNAi in intestinal progenitor cells induces the expression of many neural-specific genes, including dpn and seq. Dpn ectopic expresion explains most of the ttk-RNAi expression profile change. Seq ectopic expression explains the expression of neural-specific Notch targets in the ttk-RNAi intestinal progenitor cells.

2021-02-23 | GSE130942 | GEO

JIL-1 RNAi in Drosophila S2 Cells

Project description:Profiling of changes in steady state RNA levels upon RNAi-mediated knockdown of the chromosomal kinase JIL-1 in Drosophila S2 cells.

2011-02-01 | GSE22620 | GEO

modENCODE Drosophila RNA Binding Protein RNAi RNA-Seq Studies

Project description:Deep Sequencing of mRNA from the Drosophila melanogaster S2-DRSC cells that have been RNAi depleted of mRNAs encoding RNA binding proteins. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf

2009-10-09 | GSE18508 | GEO

RNA-Seq analysis of 9G8-RNAi intestines in Drosophila

Project description:Previous studies from our lab have characterized a group of splicing factors called SR proteins that function to identify intron/exon borders in regulating metabolic homeostasis in the Drosophila fat body. Decreasing the function of one SR protein, 9G8, causes an increase in triglyceride storage; however, the function of 9G8 in other metabolic tissues like the fly intestine is not known. Decreasing 9G8 in the Drosophila intestine results in the accumulation of triglycerides; however, the 9G8 target genes responsible for this phenotype are unknown. To address this question, we performed RNA sequencing on Drosophila intestines with 9G8 levels reduced by RNAi.

2024-12-04 | GSE283039 | GEO

Genome wide distribution of gammaH2AvD in Wild Type and RNAi dH1 Drosophila melanogaster S2 cells

Project description:Genome wide distribution of gammaH2AvD in Wild Type and RNAi dH1 Drosophila melanogaster S2 cells

2020-07-01 | GSE76912 | GEO