Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

River Sediment metagenomes of textile dye degrading communities

ABSTRACT: River Sediment metagenomes of textile dye degrading communities collected from Ankleshwar, India

PROVIDER: PRJEB20578 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1951250_1.fastq.gz	Fastqsanger.gz
	ERR1951250_2.fastq.gz	Fastqsanger.gz
	ERR1951251_1.fastq.gz	Fastqsanger.gz
	ERR1951251_2.fastq.gz	Fastqsanger.gz
	ERR1951252_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Enriched dye degrading bacterial consortia metagenome

Project description:Enriched dye degrading bacterial consortia metagenome Raw sequence reads

| PRJNA524767 | ENA

Shotgun metagenome sequencing from textile industry effluents

Project description:Textile industry wastewater effluent dominated by Shewanellaceae, Bacteroidaceae and Pseudomonadaceae harbouring genes encoding catalytic enzymes for textile dye degradation potential from Gujarat, India

| PRJNA655112 | ENA

dye-degrading enrichment culture strain:T4

Project description:An azo dye decolorizing bacterium isolated from a constructed wetland

| PRJDB35947 | ENA

Conus textile

Project description:Conus textile overview

| PRJNA1167823 | ENA

Conus textile

Project description:Conus textile Genome sequencing

| PRJNA1190839 | ENA

Conus textile

Project description:Conus textile Raw sequence reads

| PRJNA1082045 | ENA

Textile metagenome

Project description:Textile metagenome Raw sequence reads

| PRJNA735862 | ENA

Draft Genome Sequences of Two Textile Azo Dye-Degrading Shewanella sp. Strains Isolated from a Textile Effluent in Peru.

Project description:Here, we report the annotated genome sequences of two Shewanella sp. strains isolated from textile industry wastewater effluent in Peru. Potential genes for encoding enzymes that enable the strain to decolorize and degrade textile azo dyes were detected in both genomes.

| S-EPMC6895299 | biostudies-literature

on-site biocomplex textile

Project description:on-site biocomplex textile Metagenome

| PRJNA419840 | ENA

Dye Bias Array Set

Project description:Spot intensity serves as a proxy for gene expression in dual-label microarray experiments. Dye bias is defined as an intensity difference between samples labeled with different dyes attributable to the dyes instead of the gene expression in the samples. Dye bias that is not removed by array normalization can introduce bias into comparisons between samples of interest. But if the bias is consistent across the samples for the same gene, it can be corrected by proper experimental design and analysis. If the dye bias is not consistent across samples for the same gene, but is different for different samples, then removing the bias becomes more problematic, perhaps indicating a technical limitation to the ability of fluorescent signals to accurately represent gene expression. Thus, it is important to characterize dye bias to determine: (1) whether it will be removed for all genes by array normalization, (2) whether it will not be removed by normalization but can be removed by proper experimental design and analysis and (3) whether dye bias correction is more problematic than either of these and is not easily removable. Keywords: dye swap design

2006-06-06 | GSE4982 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data