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RNA-seq of total royal jelly and MRJP-3-bound RNA

ABSTRACT: RNA-seq of total royal jelly and MRJP-3-bound RNA

PROVIDER: PRJEB26475 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR2540050_1.fastq.gz	Fastqsanger.gz
	ERR2540050_2.fastq.gz	Fastqsanger.gz
	ERR2540051_1.fastq.gz	Fastqsanger.gz
	ERR2540051_2.fastq.gz	Fastqsanger.gz
	ERR2540052_1.fastq.gz	Fastqsanger.gz

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RNA-seq of total royal jelly and MRJP-3-bound RNA

Project description:MRJP-3 is an RNA binding protein that binds both double- and single-stranded RNA in vitro. To test whether i) MRJP-3 binds RNA in its natural environment, the royal jelly (RJ) and ii) to characterize its RJ RNA partners; a pull down followed by RNA-seq system was developed. MRJP-3 bound RNA was compared to total RJ RNA extracted from the same hive. To establish the system, we first incubated biotinylated MRJP-3, or biotinylated BSA in RJ and pulled the proteins out with strepavidin coated magnetic beads followed by RNA extraction and bioanalyzer profiling. MRJP-3 pull out was enriched for RNA compare to the BSA and just beads controls. The RNA population pulled down with MRJP-3 has similar profile to the total RJ RNA, further demonstrating the MRJP-3 has no affinity to a certain RNA species.

2018-10-28 | E-MTAB-6732 | biostudies-arrayexpress

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Project description:Vascular smooth muscle cells (VSMCs) are a major cell type of the arterial wall and their functionality is associated with blood pressure regulation. Although royal jelly (RJ) has reported effects on anti-hypertension, the mechanism of blood pressure regulation by major royal jelly protein 1 (MRJP1), the most abundant RJ protein, is still unknown. Therefore, mrjp1 gene was delivered into mouse VSMCs to investigate how MRJP1 influences the VSMC functionality by functional and proteomic analysis.The data here are the proteomic analysis of triplicated control and MRJP1 expressing VSMCs.

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