Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: A new genus Paramaribius gen. nov. with a new moderately halophilic species isolated from the surface of a polyethylene microplastic particle after incubation in a marine aquaria system

PROVIDER: PRJEB29347 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR2867946_1.fastq.gz	Fastqsanger.gz
	ERR2867946_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Project description:A new Ruegeria species, moderately halophilic

| PRJEB38868 | ENA

Salicibibacter kimchii strain:NKC1-1

Project description:Salicibibacter kimchii gen. nov., sp. nov., a moderately halophilic and alkalitolerant bacterium in the family Bacillaceae, isolated from kimchi

| PRJNA480743 | ENA

Halomonas socia strain:NY-011

Project description:A new species of moderately halophilic bacteria

| PRJNA609828 | ENA

Polymer type specific microplastic effects on Dreissena bugensis’ proteome, antioxidant activity and behavior

Project description:The freshwater mussel Dreissena bugensis was exposed for nine days to different microplastic particles, in detail, to three petroleum-based polymers (polyamide (PA), polyethylene terephthalate (PET), polystyrene (PS)), to one bio-based polymer (polylactic acid (PLA)) and to ground mussel shells (MS), serving as a natural particle control (size range: 20-75 µm;1000 p ml-1). Behavior endpoints were analyzed with hall sensor based real-time valvometry. Additionally, biochemical alterations of ROS detoxifying enzymes were analyzed, and a proteomic profiling on digestive gland tissue was performed.

2022-11-11 | PXD030056 | Pride

Project description:Moderately halophilic granular sludge

| PRJNA755144 | ENA

Project description:Moderately halophilic granular sludge

| PRJNA991231 | ENA

Project description:Moderately halophilic granular sludge

| PRJNA993377 | ENA

Project description:Description of Entomococcus gen nov and Properpaenibacillus gen nov

| PRJNA772559 | ENA

Marinobacter nauticus VT8

Project description:Moderately halophilic hydrocarbon-degrading bacterium

| PRJNA13239 | ENA

The interaction of microplastics with the ruminal ecosystem in vitro

Project description:Mismanagement of plastic waste has contributed to plastic pollution in marine and terrestrial ecosystems. Therefore, farm animals are likely to consume microplastic (MP) contaminated feed. However, the interactions of MP with the ruminal microbial ecosystem remain poorly understood. This study investigated the interaction of MP within the ruminal ecosystem in vitro using the Hohenheim Gas Test. Different MP variants were applied, reflecting different combinations of five MP species (polylactide, polyhydroxy butyric acid, high-density polyethylene, polyvinyl chloride, polypropylene), in two particle size ranges (<125 μm; 125-500 μm) and increasing dosages (from 0 to 70 mg /incubation cylinder) together with ruminal fluid and hay or barley as substrates. Cumulative gas production, pH and dry matter disappearance were determined before analyzing volatile fatty acids, metaproteomics and metabolomics. In the presence of MP, cumulative gas production decreased regardless of the MP 63 species, dose or particle size, while total dry matter degradation increased. Microbial proteins in barley incubations showed lower Bacteroidetes and increasing Firmicutes abundance in the presence of MP and increased activities of the protein groups `replication and repair`, and `translation`, but decreased activities of `carbohydrate metabolism and transport` and `amino acids metabolism`. The data indicated that MP, regardless of their species and particle size, interact with the ruminal microbiome and may be partially degraded in vitro. This suggests a reduction of MP size in the rumen thereby increasing the likelihood to penetrate animal tissues. Future research must confirm the findings in vivo and determine their consequences for animal health and consumer safety.

2026-03-27 | PXD065755 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data