Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Impact of Plant Genetic Structure on Differentiation in Phyllosphere Fungal Communities between Mainland and Island Populations of Mussaenda kwangtungensis

ABSTRACT: Impact of Plant Genetic Structure on Differentiation in Phyllosphere Fungal Communities between Mainland and Island Populations of Mussaenda kwangtungensis

PROVIDER: PRJEB30598 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Mainland and island populations of Mussaenda kwangtungensis differ in their phyllosphere fungal community composition and network structure.

Project description:We compared community composition and co-occurrence patterns of phyllosphere fungi between island and mainland populations within a single plant species (Mussaenda kwangtungensis) using high-throughput sequencing technology. We then used 11 microsatellite loci for host genotyping. The island populations differed significantly from their mainland counterparts in phyllosphere fungal community structure. Topological features of co-occurrence network showed geographic patterns wherein fungal assemblages were less complex, but more modular in island regions than mainland ones. Moreover, fungal interactions and community composition were strongly influenced by the genetic differentiation of host plants. This study may advance our understanding of assembly principles and ecological interactions of phyllosphere fungal communities, as well as improve our ability to optimize fungal utilization for the benefit of people.

| S-EPMC6976661 | biostudies-literature

Transcriptome analysis of Arthrobacter in the phyllosphere

2013-06-21 | GSE48198 | GEO

Project description:Mainland and Island Populations of Mussaenda kwangtungensis Have Different Phyllosphere Fungal Community Composition and Network Structure

| PRJNA579231 | ENA

Mussaenda lancipetala

Project description:Mussaenda lancipetala overview

| PRJNA1363659 | ENA

Primula kwangtungensis

Project description:Primula kwangtungensis overview

| PRJNA1157497 | ENA

Transcriptome analysis of Arthrobacter in the phyllosphere

Project description:Arthrobacter chlorophenolicus A6 is a 4-chlorophenol degrading soil bacterium with high phyllosphere colonization capacity. Till now the genetic basis for the phyllosphere competency of Arthrobacter or other pollutant-degrading bacteria is uncertain. We investigated global gene expression profile of A. chlorophenolicus grown in the phyllosphere of common bean (Phaseolus vulgaris) compared to growth on agar surfaces. We designed transcriptome arrays and investigated which genes had different transcript levels in the phyllosphere of common bean (Phaseolus vulgaris) as compared to agar surfaces. Since water availability is considered an important factor in phyllosphere survival and activity, we included both high and low relative humidity treatments for the phyllosphere-grown cells. In addition, we determined the expression profile under pollutant exposure by the inclusion of two agar surface treatments, i.e. with and without 4-chlorophenol.

2013-06-21 | E-GEOD-48198 | biostudies-arrayexpress

Mussaenda lancipetala

Project description:Genome of Mussaenda lancipetala (PRJCA040958)

| PRJDB36978 | ENA

Scopelodes kwangtungensis

Project description:Scopelodes kwangtungensis Genome sequencing and assembly

| PRJNA818495 | ENA

Mussaenda lancipetala

Project description:Transcriptome sequencing of three Mussaenda species (PRJCA040960)

| PRJDB36980 | ENA

Primula kwangtungensis

Project description:Genome de novo assembly of Primula kwangtungensis