Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome sequencing of the Bacillus methylotrophicus strain IC4

ABSTRACT: De novo whole genome sequencing of Bacillus methylotrophicus strain IC4, a poly-γ-glutamic acid producer

PROVIDER: PRJEB32025 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR3262817_1.fastq.gz	Fastqsanger.gz
	ERR3262817_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Whole genome sequencing of the B.subtilis strain Natto3

Project description:De novo whole genome sequencing of B.subtilis strain Natto3, a poly-γ-glutamic acid producer

| PRJEB31748 | ENA

Guo2016 - Bacillus licheniformis (iWX1009)

Project description:FROG and miniFROG reports are given for the genome-scale metabolic network of Bacillus licheniformis WX-02. The model iWX1009 contains 1009 genes, 1141 metabolites and 1762 reactions and is the study of poly-γ-glutamic acid (γ-PGA) synthesis. The model can be found in the Supplementary data of the Guo et al, 2016 paper cited here.

2024-10-15 | MODEL2408030002 | BioModels

gut metagenome

Project description:Changes in gut microbiome by poly-gamma-glutamic acid and galactooligosaccharide intake

| PRJDB12429 | ENA

Project description:Effects of poly-gamma-glutamic acid application on soil bacterial community composition

| PRJNA1197718 | ENA

human gut metagenome

Project description:Changes in gut microbiome by intake of poly-gamma-glutamic acid and galactooligosaccharide

| PRJDB12430 | ENA

The effect of citrate supplementation on medium viscosity and poly-γ-glutamic acid synthesis by engineered B. subtilis 168

Project description:The industrially attractive biopolymer Poly-γ-glutamic acid (γ-PGA) is commonly produced by species of the genus Bacillus by co-feeding different carbon- and nitrogen sources. Recent studies have highlighted the pivotal role of co-metabolization of a rapidly degradable carbon source such as glycerol together with citrate for γ-PGA production, independently fueling biomass generation as well as TCA cycle precursor supply. With this study, we report that the sole presence of citrate in the production medium greatly influences growth behavior, γ-PGA production, and the viscosity of microbial cultures during biopolymer synthesis. Independent of the citrate concentration in the medium. only minor amounts of citrate were imported by B. subtilis 168 in presence of glycerol due to carbon catabolite repression. However, a high citrate concentration resulted in a 6-fold increase in γ-PGA titer as compared to low levels of exogenous citrate. Data suggests that citrate was not used as a precursor in γ-PGA synthesis but rather influenced the fate of imported glutamate. The citrate concentration also affected medium viscosity as depletion resulted in a remarkable spike in broth viscosity. Additionally, cellular proteome analysis at different levels of citrate availability revealed significant changes in protein abundance involved in motility and fatty acid degradation

2025-02-10 | PXD058048 | Pride

Bacillus subtilis Ia1a PGA

Project description:Draft genome sequence of Bacillus subtilis Ia1a, a new strain for poly-gamma-glutamic acid and exopolysaccharides production

| PRJEB15106 | ENA

Project description:Rhizosphere soil bacterial community in chromium-contaminated or copper-contaminated soil with poly-gamma-glutamic acid application

| PRJNA1126063 | ENA

Project description:glutamic acid addition

| PRJNA1059744 | ENA

Bacillus velezensis

Project description:Bacillus methylotrophicus overview

| PRJNA263747 | ENA