Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MRNA-seq of SW480 USP22 knockdown cells

ABSTRACT: mRNA-seq of SW480 USP22 knockdown cells

PROVIDER: PRJEB33859 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR3466681.fastq.gz	Fastqsanger.gz
	ERR3466682.fastq.gz	Fastqsanger.gz
	ERR3466683.fastq.gz	Fastqsanger.gz
	ERR3466684.fastq.gz	Fastqsanger.gz
	ERR3466685.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

mRNA-seq of SW480 USP22 knockdown cells

Project description:This analysis identifies genes which are affected in SW480 cells upon siRNA-mediated USP22 knockdown

2019-12-05 | E-MTAB-8214 | biostudies-arrayexpress

mRNA-seq of MCF10A USP22 knockdown cells

Project description:mRNA-seq of MCF10A USP22 knockdown cells

| PRJEB34009 | ENA

mRNA-seq of HCT116 USP22 knockdown cells

Project description:mRNA-seq of HCT116 USP22 knockdown cells

| PRJEB29794 | ENA

mRNA-seq of SW837 USP22 knockdown cells

Project description:mRNA-seq of SW837 USP22 knockdown cells

| PRJEB33860 | ENA

mRNA-seq of HCT116 USP22 knockdown cells

Project description:This analysis identifies genes which are affected in HCT116 cells upon USP22 knockdown

2019-10-26 | E-MTAB-7393 | biostudies-arrayexpress

mRNA-seq of SW837 USP22 knockdown cells

Project description:This analysis identifies genes which are affected in SW837 cells upon siRNA-mediated USP22 knockdown

2019-12-06 | E-MTAB-8215 | biostudies-arrayexpress

mRNA-seq of MCF10A USP22 knockdown cells

Project description:This analysis identifies genes which are affected in MCF10A cells upon siRNA-mediated USP22 knockdown

2019-12-06 | E-MTAB-8247 | biostudies-arrayexpress

Next Generation Sequencing Facilitates Quantitative Analysis of SW480 cells and HPSE-knockdown SW480 cells Transcriptomes

Project description:Heparanase (HPSE), the only known mammalian endoglycosidase responsible for heparan sulfate cleavage, is a multi-faceted protein affecting multiple malignant behaviors in cancer cells. The goals of this study are to compare the mRNA transcriptome differences between SW480 cells and HPSE-knockdown SW480 cells. Methods: mRNA profiles of SW480 cells and HPSE-knockdown SW480 cells were generated by deep sequencing, in triplicate, using Illumina.

2019-02-14 | GSE126504 | GEO

RNA-seq data for USP22 knockdown in Huh7 cells

Project description:USP22 plays oncogenic roles and in order to identify the molecular mechanism of USP22 to promote tumorigenesis, RNA-seq was performed on Huh7 cells with or without USP22.

2021-04-10 | GSE171225 | GEO

Ezrin knockdown in SW480

Project description:Analysis of SW480 cells following knockdown of Ezrin using RNAi. Ezrin is a protein that regulate the organization of cytoskeleton. Ezrin KD SW480 was used to study the role of ezrin in colon cancer. Keywords: ezrin, colon cancer, migration

2008-04-29 | GSE11279 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data