Dataset Information

MetaRNA test

ABSTRACT: HoloFood Salmon metatranscriptomics sequencer benchmarking test

PROVIDER: PRJEB38473 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	ERR4179440_1.fastq.gz	Fastqsanger.gz
	ERR4179440_2.fastq.gz	Fastqsanger.gz
	ERR4179530_1.fastq.gz	Fastqsanger.gz
	ERR4179530_2.fastq.gz	Fastqsanger.gz
	ERR4179441_1.fastq.gz	Fastqsanger.gz

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Project description:An experimental trial was conducted on juvenile farmed Atlantic salmon (Salmo salar) in the framework of the HoloFood project, which aims to test the effect of novel sustainable feed additives in the feed of farmed salmon. Trial B blue mussel was used as a novel sustainable protein feed source in the diet of Atlantic salmon. Blue mussel represents an alternative, more sustainable protein source than traditional fishmeal. The blue mussel meal was produced by de-shelled blue mussels, which were subsequently spray-dried. It was integrated into the diet, mainly replacing fishmeal as the protein source. HoloFood Trial B - blue mussel-dose response is reported in the current study <a href='https://www.ebi.ac.uk/metabolights/MTBLS4382' rel='noopener noreferrer' target='_blank'>MTBLS4382</a>.HoloFood Trial A - seaweed-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4381' rel='noopener noreferrer' target='_blank'>MTBLS4381</a>.HoloFood Trial C - blue mussel ensilage-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4384' rel='noopener noreferrer' target='_blank'>MTBLS4384</a>.HoloFood Trial D - fermented seaweed open water-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS6733' rel='noopener noreferrer' target='_blank'>MTBLS6733</a>.HoloFood Trial 1/2/3 is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS6988' rel='noopener noreferrer' target='_blank'>MTBLS6988</a>. Linked cross omic data sets:Nucleic acid data associated with this study are available in the European Nucleotide Archive (ENA): accession number <a href='https://www.ebi.ac.uk/ena/browser/view/PRJEB43192' rel='noopener noreferrer' target='_blank'>PRJEB43192</a>.Metagenomic data associated with this study are available from MGnify under the Super Study '<a href='https://www.ebi.ac.uk/metagenomics/super-studies/holofood' rel='noopener noreferrer' target='_blank'>holofood</a>'.

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MetaRNA test

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