Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: IMAGE project: Innovative Management of Animal Genetic Resources

PROVIDER: PRJEB38981 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4280260_1.fastq.gz	Fastqsanger.gz
	ERR4280260_2.fastq.gz	Fastqsanger.gz
	ERR4280270_1.fastq.gz	Fastqsanger.gz
	ERR4280270_2.fastq.gz	Fastqsanger.gz
	ERR4280261_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 26

Similar Datasets

E-GEOD-20388

Project description:Expression Profiling of a Genetic Animal Model of Depression

2015-09-15 | E-GEOD-20388 | ExpressionAtlas

E-ENAD-34

Project description:BLUEPRINT EpiVar project: Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells

2020-04-22 | E-ENAD-34 | ExpressionAtlas

Project description:Genetic diversity of Important Animal Resources III-2 in Korea

| PRJNA493672 | ENA

Project description:Genetic diversity of Important Animal Resources III-2 in Korea

| PRJNA792906 | ENA

Project description:Genetic diversity of Important Animal Resources III-2 in Korea

| PRJNA514415 | ENA

Proteomic and Genomic Profiling of Plasma Exosomes from Ankylosing Spondylitis Patients

Project description:Recent advances in knowledge of the biology of Ankylosing Spondylitis (AS) using innovative genetic and biomarker approaches offer the opportunity to address current challenges in AS diagnosis and management. Altered expression of microRNAs (miRNAs) may contribute to immune dysregulation and play a significant role in the onset and persistence of inflammation in AS. The capacity of exosomes to transport miRNAs between cells, thereby inducing phenotypic alterations in recipient cells has been the subject of considerable attention in recent years. This study reports the first comprehensive miRNA profiling of plasma-derived exosomes utilizing Gene Ontology (GO) annotation and pathway analysis.

2022-12-08 | GSE220130 | GEO

Project description:IMAGE project: CGN Genebank Horse

| PRJEB58829 | ENA

Project description:IMAGE project: CGN Genebank Sheep

| PRJEB57696 | ENA

Project description:IMAGE project: CGN Genebank Cattle

| PRJEB60909 | ENA

Assessing Genetic Diversity of Asian Salamanders (Hynobiidae) lived in Far East Asia using Transcriptome data

Project description:Asian salamander Hynobiidae is commonly observed in the Far East Asia regions, including Korea, Japan, China, and the eastern region of Russia. In Korea, there are four Hynobiidae species known to be lived: Hynobius leechii, Hynobius quelpaertensis, Hynobius yangi, and recently reported Hynobius unisacculus. However, even H. leechii which is broadly colonized in Korea peninsula seems to have a new species candidate, which has distinctive genetic and phenotypic characteristics. Genomic resources are essential to understand the current status of these species, but due to the large size of their genomes (about 16 to 20 Gb), it is not easy to analyze. To reveal the genomic characteristics of these species, we constructed more than ten thousands of protein-coding gene sequences from multiple samples of each species, using the de novo transcriptome assembly approach from RNA-Seq data, confirming their taxonomic relationship which was reported based on mitochondrial DNA and marker genes. Also, by comparing previously reported transcriptome of Hynobius chinensis and Hynobius retardatus, lived in China and Japan, respectively, we found that Korean species have unique genetic signatures. By comparing vertebrate model organism genes, we reported Hynobidaii specific proteins. These data would be a useful resource to study other Caudata species in the future. This research was supported by the National Institute of Biological Resources, Republic of Korea, under the project "Genetic diversity of animal resources” (NIBR201703203 and NIBR201803101).

2019-12-24 | GSE137677 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data