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SOX11 ChIP-seq in neuroblastoma cell line IMR-32

ABSTRACT: SOX11 ChIP-seq in neuroblastoma cell line IMR-32

PROVIDER: PRJEB39951 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR4471010.fastq.gz	Fastqsanger.gz
	ERR4471011.fastq.gz	Fastqsanger.gz
	ERR4471012.fastq.gz	Fastqsanger.gz
	ERR4471013.fastq.gz	Fastqsanger.gz
	ERR4471014.fastq.gz	Fastqsanger.gz

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SOX11 ChIP-seq in neuroblastoma cell line IMR-32

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RNA-seq of human IMR-32 neuroblastoma cell line with SOX11 knockdown as compared to control

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ATAC-seq in neuroblastoma IMR-32 cell line

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Project description:RNA-seq of human IMR-32 neuroblastoma cell line with SOX11 knockdown as compared to control

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RNAseq in IMR-32 neuroblastoma cells

Project description:IMR-32 cells were subjected to lentiviral YRNA infection or nELAVL RNAi and/or UV stress followed by RNAseq analysis to monitor RNA level changes

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RNAseq in IMR-32 neuroblastoma cells

Project description:IMR-32 cells were subjected to lentiviral YRNA infection or nELAVL RNAi and/or UV stress followed by RNAseq analysis to monitor RNA level changes RNA from IMR-32 cells was Trizol extracted, Ribominus selected and submitted for high-throughput sequencing.

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Temporal Quantitative Proteomic Profiling of SH-SY5Y and IMR-32 Neuroblastoma Cells During All-trans Retinoic Acid-Induced Neuronal Differentiation

Project description:The human neuroblastoma cell lines SH-SY5Y and IMR-32 can be differentiated into neuron-like phenotypes through treatment with all-trans retinoic acid (ATRA). After differentiation, these cell lines are extensively utilized as in vitro models to study various aspects of neuronal cell biology. However, temporal and quantitative profiling of the proteome and phosphoproteome of SH-SY5Y and IMR-32 cells throughout ATRA-induced differentiation has been limited. Here, we performed relative quantification of the proteomes of SH-SY5Y and IMR-32 cells at multiple time points during ATRA-induced differentiation. The data presented serve as a valuable resource for investigating temporal protein and phosphoprotein abundance changes in SH-SY5Y and IMR-32 cells during ATRA-induced differentiation.

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Temporal Quantitative Phosphoproteomic Profiling of SH-SY5Y and IMR-32 Neuroblastoma Cells During All-trans Retinoic Acid-Induced Neuronal Differentiation

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2024-01-24 | PXD046871 | Pride

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