Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Riverine microplastics

ABSTRACT: Riverine microplastics and associated microbial assemblages

PROVIDER: PRJEB41771 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4970190_1.fastq.gz	Fastqsanger.gz
	ERR4970190_2.fastq.gz	Fastqsanger.gz
	ERR4970200_1.fastq.gz	Fastqsanger.gz
	ERR4970200_2.fastq.gz	Fastqsanger.gz
	ERR4970210_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 160

Similar Datasets

Ecological transcriptomics of lake-type and riverine sockeye salmon (Oncorhynchus nerka) muscle tissue

Project description:We sampled lake-type and riverine sockeye in the pristine natural habitats of Aniakchak National Monument and Preserve, Alaska USA.

2011-09-10 | GSE31214 | GEO

Ecological transcriptomics of lake-type and riverine sockeye salmon (Oncorhynchus nerka) muscle tissue

Project description:We sampled lake-type and riverine sockeye in the pristine natural habitats of Aniakchak National Monument and Preserve, Alaska USA. Samples were taken on the same day and close proximite in time. We sampled 17 riverine individuals from Albert Johnson Creek and 13 individuals from Surprise Lake. cDNA from a single individual on the Cy5 was compared with a reference of aRNA on the Cy3.

2011-09-09 | E-GEOD-31214 | biostudies-arrayexpress

Profiles of bacterial assemblages on microplastics in Singapore

Project description:Profiles of bacterial assemblages on microplastics in Singapore

| PRJEB36108 | ENA

Pollutants bioavailability and toxicological risk from microplastics to marine mussels

Project description:Microplastics represent a growing environmental concern for the oceans due to their potential capability to adsorb different classes of pollutants, thus representing a still unexplored source of exposure for aquatic organisms. In this study polystyrene (PS) microplastics were characterized for their capability to adsorb pyrene (PYR) as model compound for polycyclic aromatic hydrocarbons, and transfer this chemical to filter feeding mussels Mytilus galloprovincialis. Gene expression analyses of Mytilus galloprovincialis exposed to polystyrene (PS) microplastics and to polystyrene contaminated with pyrene (PS-PYR) have been performed trough a DNA microarray platform.

2014-12-27 | GSE57460 | GEO

Impact of sulfamethoxazole on a riverine microbiome

Project description:Freshwater environments such as rivers receive effluent discharges from wastewater treatment plants, representing a potential hotspot for antibiotic resistance genes (ARGs). These effluents also contain low levels of different antimicrobials including biocides and antibiotics such as sulfonamides that can be frequently detected in rivers. The impact of such exposure on ARG prevalence and microbial diversity of riverine environment is unknown, so the aim of this study was to investigate the release of a sub-lethal concentration (<4 g L-1) of the sulfonamide compound sulfamethoxazole (SMX) on the river bacterial microbiome using a microflume system. This system was a semi-natural in-vitro microflume using river water (30 L) and sediment, with circulation to mimic river flow. A combination of ‘omics’ approaches were conducted to study the impact of SMX exposure on the microbiomes within the microflumes. Metaproteomics did not show differences in ARGs expression with SMX exposure in water.

2021-07-06 | PXD023822 | Pride

Microplastics and soils

Project description:Microbial diversity on microplastics and in soils

| PRJNA742782 | ENA

Impact of heat stress on transcriptional adaptation of mammary epithelial cells in riverine buffalo (Bubalus bubalis)

Project description:The primary mammary epithelial cells of riverine buffalo were exposed to thermal stress condition at 42C for one hour. The cells were subsequently allowed to recover at 37C and harvested at different time intervals (30 min to 48 h) along with control samples (un-stressed). The study has identified several genes from different functional classes and biological pathways which could be termed as heat responsive in buffalo MEC

2016-08-26 | GSE84486 | GEO

riverine metagenome

Project description:Microbial DNA sequencing in the Kanogawa riverine systems

| PRJDB13136 | ENA

riverine metagenome

Project description:riverine metagenome Metagenome

| PRJNA480954 | ENA

riverine metagenome

Project description:riverine metagenome Metagenome

| PRJNA358739 | ENA