Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: EMG produced TPA metagenomics assembly of PRJEB39386 data set (Estuarine microbiome exposed to copper oxide nanoparticles).

PROVIDER: PRJEB41854 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4404432.fasta.gz	Fasta.gz
	ERR4404430.fasta.gz	Fasta.gz
	ERR4404428.fasta.gz	Fasta.gz
	ERR4404431.fasta.gz	Fasta.gz
	ERR4404427.fasta.gz	Fasta.gz

Items per page:

1 - 5 of 6

Similar Datasets

Nanosed

Project description:Estuarine microbiome exposed to copper oxide nanoparticles

| PRJEB39386 | ENA

Gene expression profile in zebrafish D. rerio exposed to metal oxidate nanoparticles

Project description:Metal oxide nanoparticles can exert adverse effects on humans and aquatic organisms. However, the toxic effects and mechanisms of MO-NPs are not clearly understood.We investigated the toxic effects and mechanisms of copper oxide, zinc oxide, and nickel oxide nanoparticles in Danio rerio using microarray analysis.

2018-03-20 | GSE112016 | GEO

Project description:EMG produced TPA metagenomics assembly of PRJNA479723 data set (Nanopore metagenomics).

| PRJEB42552 | ENA

Project description:EMG produced TPA metagenomics assembly of PRJEB30246 data set (Metagenomic_analysis_nasopharyngeal_colonisation).

| PRJEB75197 | ENA

Project description:EMG produced TPA metagenomics assembly of PRJNA986291 data set (CForBio.metagenome).

| PRJEB71756 | ENA

Project description:EMG produced TPA metagenomics assembly of PRJNA639280 data set (v).

| PRJEB72785 | ENA

Project description:EMG produced TPA metagenomics assembly of PRJNA763981 data set (SOYBEAN RHIZOSPHERE METAGENOMICS).

| PRJEB54995 | ENA

Project description:EMG produced TPA metagenomics assembly of PRJEB25419 data set (Breast Cancer Metagenomics).

| PRJEB51311 | ENA

Project description:EMG produced TPA metagenomics assembly of PRJEB28161 data set (TNBS mice metagenomics).

| PRJEB60944 | ENA

Effect of Cu-Nanoparticles versus Cu-salt in Enchytraeus albidus (Oligochaeta): differential gene expression through microarray analysis

Project description:Despite the increased utilization of nanoparticles, the behavior and effect in the environment is largely unknown and few resources are available for health and environmental effect studies. Enchytraeids are extensively used in studies of soil ecotoxicology and recently, a cDNA microarray for Enchytraeus albidus was developed, allowing also toxicogenomic studies in this species. These organisms are ecologically relevant small worms that indirectly contribute to the regulation and degradation of organic matter. In this study we compared the gene expression profiles of E. albidus when exposed to copper-salt (CuCl2) and copper nanoparticles (Cu-NP) spiked soil. The worms were exposed for 48 hours in soil to a range of concentrations. Microarray hybridizations revealed different response patterns between copper-salt and copper nanoparticles exposed organisms, these differences are mainly related with transcripts involved in the energy metabolism of the organisms. Despite unknown gene function in the data-set there are indications that Cu-salt and Cu-NP exposure induced specific gene level responses.

2011-09-08 | GSE26331 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data