Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq of WT vs isw1 delta S. cerevisiae cells during Unfolded Protein Response time course

ABSTRACT: RNA-seq of WT vs isw1 delta S. cerevisiae cells during Unfolded Protein Response time course

PROVIDER: PRJEB45222 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR5956400_1.fastq.gz	Fastqsanger.gz
	ERR5956400_2.fastq.gz	Fastqsanger.gz
	ERR5956391_1.fastq.gz	Fastqsanger.gz
	ERR5956391_2.fastq.gz	Fastqsanger.gz
	ERR5956401_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

RNA-seq of rrp6 delta S. cerevisiae cells during Unfolded Protein Response time course

Project description:RNA-seq of rrp6 delta S. cerevisiae cells during Unfolded Protein Response time course

| PRJEB72207 | ENA

RNA-seq of WT vs isw1 delta S. cerevisiae cells during Unfolded Protein Response time course

Project description:UPR Time course of WT and isw1delta cells. ER stress induced by 1ug/mL Tunicamycin treatment. 3 time points: Untreated, Tm 2H , Wash 3H Untreated = no treatment T2 = two-hour Tm treatment (1ug/mL) T3= Wash 3H = wash of the cells after the two-hour Tm treatment and 3-hour recovery in medium without drug

2022-10-06 | E-MTAB-10511 | biostudies-arrayexpress

RNA-seq of rrp6 delta S. cerevisiae cells during Unfolded Protein Response time course

Project description:UPR Time course of rrp6 delta cells. ER stress induced by 1ug/mL Tunicamycin treatment. 3 time points: Untreated, Tm 2H , Wash 3H Untreated = no treatment T2 = two-hour Tm treatment (1ug/mL) T3= Wash 3H = wash of the cells after the two-hour Tm treatment and 3-hour recovery in medium without drug

2025-02-04 | E-MTAB-13744 | biostudies-arrayexpress

Histone exchange in wildtype, isw1, chd1, isw1 chd1 and ioc4 yeast strains

Project description:Histone exchange in wildtype, isw1, chd1, isw1 chd1 and ioc4 yeast strains.

2012-07-25 | GSE32043 | GEO

Interplay between acetylation and ubiquitination of Isw1 confers multidrug resistance in Cryptococcus neoformans

Project description:Lysine acetylation and ubiquitination are one of many protein modifications and play a crucial role in the biological regulation of many organisms, but little is known about the relationship between acetylation and ubiquitination few. Here, the Isw1 protein is an important member of the chromatin remodeling complex, and we performed single-protein modification mass spectrometry detection of the C. neoformans Isw1 protein and site mutations for both detected modifications. The data showed that the two modifications of Cryptococcus neoformans Isw1 protein have a balance of each other. Acetylation can maintain protein stability and maintain protein function, while ubiquitination can reduce protein level and maintain Isw1 protein expression. The expression level of Isw1 protein leads to resistance to antifungal drugs. These results reveal the resistance mechanism of Isw1 protein of Cryptococcus neoformans to antifungal drugs.

2022-12-26 | PXD037150 | Pride

Isw1 and Chd1 maintain chromatin organization during transcription [K56ac data]

Project description:ChIP-chip assays to determine the occupancy of acetylated histone H3 K56 in wildtype, isw1, chd1, isw1 chd1 and ISW1[K227R] yeast.

2012-07-25 | GSE36405 | GEO

rrp6 delta and rrp6 delta, trf4 delta vs WT

Project description:BMA64 rrp6 delta::HIS3 vs BMA64 WT (Mat a), grown at 30°C to OD 0.6 in YPD. BMA64 rrp6 delta::URA3, trf4 delta::KAN vs BMA64 WT, grown at 30°C to OD<0.6 in YPD. Keywords: other

2005-04-28 | GSE2579 | GEO

NASH time course

Project description:NASH time course

| PRJNA1010345 | ENA

Circadian time course

Project description:Circadian time course

| PRJNA98585 | ENA

Isw1 and Chd1 maintain chromatin organization during transcription [isw1 chd1 mutant expression]

Project description:Gene expression microarray experiments to determine the existence of intragenic (cryptic) transcripts in an isw1 chd1 mutant yeast strain.

2012-07-25 | GSE37158 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data