Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA sequencing of VSV

ABSTRACT: Transcriptome sequencing of VSV

PROVIDER: PRJEB46127 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR6209360.fastq.gz	Fastqsanger.gz
	ERR6209370.fastq.gz	Fastqsanger.gz
	ERR6209361.fastq.gz	Fastqsanger.gz
	ERR6209371.fastq.gz	Fastqsanger.gz
	ERR6209362.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 43

Similar Datasets

RNA-seq of wild-type and Ptenα-/- MEFs under VSV infection

Project description:To explore the effect of Ptenα on antiviral immunity pathway, we conducted RNA transcriptome profiling of wild-type and Ptenα-/- MEFs (mouse embryonic fibroblast cells) in response to VSV (vesicular stomatitis virus)

2024-02-19 | GSE210684 | GEO

Wild-type and GLO2 knockout BMDMs with infection of VSV

Project description:Transcriptome analysis of wild-type and GLO2 knockout BMDM infected with VSV for 12 hours .

2024-07-01 | GSE248885 | GEO

Genome wide RNA-seq of iBMDMs upon VSV infection

Project description:VSV infection affects various gene expression

2018-10-05 | GSE120820 | GEO

VSV infected mouse peritoneal macrophages with treatment of DiFMOC-G

Project description:Transcriptome analysis of peritoneal macrophages infected with VSV (12h) and with or without pre-treatment of DiFMOC-G for 12 hours .

2024-05-01 | GSE230699 | GEO

RNA-seq Analysis of Vesicular Stomatitis Virus (VSV)-Infected RAW264.7 Macrophages with and without Prior BCG-lysate Exposure

Project description:Our findings demonstrated that BCG treatment significantly reduced the intracellular viral titers of Vesicular Stomatitis Virus (VSV). To explore the molecular mechanisms responsible for the enhanced antiviral immunity of BCG-trained macrophages, we conducted RNA sequencing analysis on RAW264.7 cells infected with VSV, comparing macrophages pre-exposed to BCG with those without prior exposure.

2025-02-25 | GSE284009 | GEO

CLIP-seq of VSV-infected HEK293T cells overexpressed PTENα

Project description:To determine whether PTENα directly binds to viral RNA, we performed Cross-Linking and Immunoprecipitation (CLIP) sequencing of HEK293T cells transfected with vector encoding PTENα under VSV (vesicular stomatitis virus) infection

2024-08-15 | GSE211294 | GEO

UV-RIP experiments of ZNFX1 in VSV infected A549 cells

Project description:UV-RIP-seq was used to identify VSV-RNA associated with endogenous ZNFX1 in VSV infected A459 cells.

2019-08-30 | GSE132977 | GEO

miRNA profiling of mouse primary peritoneal macrophages infected with vesicular stomatitis virus (VSV)

Project description:To investigate whether and what miRNAs expression might be regulated by VSV (vesicular stomatitis virus?) challenge, we analyzed the miRNA expression profile of mouse primary peritoneal macrophages infected with VSV by using an array-based miRNA profiling. After the infection of VSV at MOI 10 for 48 h, the array revealed that many miRNAs were up-regulated in macrophages?

2009-05-11 | E-MEXP-2110 | biostudies-arrayexpress

UV cross-linking RIP-seq of VSV-GFP-infected HEK293T cells overexpressed PTENα

Project description:To determine whether PTENα directly binds to viral RNA or host mRNA, we performed UV cross-linking RNA immunoprecipitation (RIP) sequencing of HEK293T cells transfected with vector encoding PTENα under VSV-GFP (green fluorescent protein-expressing vesicular stomatitis virus) infection

2024-02-19 | GSE218439 | GEO

Effect of PFKFB3 overexpression on A549 in VSV infection.

Project description:To investigate the function PFKFB3 in RNA virus infection, we established PFKFB3 overexpressed A549 cell lines and infected cells with VSV.

2025-08-01 | GSE210288 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data