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Small RNA-Seq of influenza A/Puerto Rico/8/1934 (H1N1) virus infected A549 human cells

ABSTRACT: Small RNA-Seq of influenza A/Puerto Rico/8/1934 (H1N1) virus infected A549 human cells

PROVIDER: PRJEB55477 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR10093723.fastq.gz	Fastqsanger.gz
	ERR10093724.fastq.gz	Fastqsanger.gz
	ERR10093725.fastq.gz	Fastqsanger.gz
	ERR10093726.fastq.gz	Fastqsanger.gz
	ERR10093727.fastq.gz	Fastqsanger.gz

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Small RNA-Seq of influenza A/Puerto Rico/8/1934 (H1N1) virus infected A549 human cells

Project description:To study expression pattern of small nucleolar RNAs (snoRNAs) during influenza A viral infection, human cells A549 were infected with influenza A/Puerto Rico/8/1934 (H1N1) virus. Small RNA-seq analysis of infected cells after 24 h or 48 h incubation was performed on an Illumina NextSeq 500 platform. The same mock-infected cells were used as control. Small RNA fractions (<200 nucleotide length) was used for constructing of cDNA libraries. Differential expressed non-coding RNAs were identified using R package DESeq2.

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Analysis of global gene expression profiles of A549 cells treated with Xrn2 siRNA upon Influenza A/PR/8/34(ΔNS1) Infection

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