Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Candida verbasci genome sequencing

PROVIDER: PRJEB56292 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR10286775.fastq.gz	Fastqsanger.gz
	ERR10286776_1.fastq.gz	Fastqsanger.gz
	ERR10286776_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

A multicenter translational biomarker phase II trial of regorafenib in patients with non-resectable pretreated colorectal cancer.

Project description:Primary objectives: The primary objective is to investigate circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS). Primary endpoints: circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS).

| 2533916 | ecrin-mdr-crc

Whole genome sequencing of Candida albicans tunicamycin adaptors

Project description:We used Candida albicans lab strain SC5314 to obtain tunicamycin adaptors. We did whole genome sequencing of the adaptors and the parent as well.

2021-04-24 | E-MTAB-10358 | biostudies-arrayexpress

Shargacucullia verbasci

Project description:Shargacucullia verbasci overview

| PRJNA911393 | ENA

E-GEOD-18068

Project description:Genome-wide transcriptome sequencing at different stages of Drosophila melanogaster development, RNA-seq

2020-07-22 | E-GEOD-18068 | ExpressionAtlas

ilShaVerb

Project description:Shargacucullia verbasci (mullein moth)

| PRJEB56253 | ENA

ilShaVerb5

Project description:Shargacucullia verbasci (mullein moth) genome assembly, ilShaVerb5

| PRJEB58167 | ENA

Proteomic analysis of the dpp3 knockout mutant, the reconstituted strain and the wild-type strain of Candida lusitaniae

Project description:Candida lusitaniae is an emerging human opportunistic yeast, which can switch from yeast to pseudohyphae, and one of the rare Candida species capable of sexual reproduction. Its haploid genome and the genetic tools available make it a model of interest to study gene function. This study describes the consequences of DPP3 inactivation on cell morphology and mating, both altered in the dpp3Δ knock-out. Interestingly, reintroducing a wild-type copy of the DPP3 gene in the dpp3Δ mutant failed to restore the wild-type phenotypes. Proteomic analyses showed that about 150 proteins were statistically deregulated in the dpp3Δ mutant, and that most of them did not return to their wild-type level in the reconstituted DPP3 strain. The analysis of the segregation of the dpp3Δ mutation and the phenotypes in the progeny of a cross (between the dpp3Δ knock-out and a wild-type strain) showed that the phenotypes are not linked to dpp3Δ, but to a secondary mutation. Genome sequencing of the dpp3Δ mutant allowed us to identify this secondary mutation.

2023-05-02 | PXD020220 | Pride

E-GEOD-58326

Project description:Transcription profiling by high throughput sequencing of ZNF217 chromatin occupancy in the breast cancer cell genome

2025-01-24 | E-GEOD-58326 | ExpressionAtlas

Whole genome sequencing of Candida albicansSC5314 treated with brefeldin A

Project description:We treated Candida albicans lab strain SC5314 with brefeldin A and we did whole genome sequencing of 18 adaptors

2021-04-23 | E-MTAB-10351 | biostudies-arrayexpress

Whole genome sequencing of Candida albicans SC5314 treated with fluorouracil adaptors

Project description:We treated Candida albicans lab strain SC5314 with fluorouracil and we did whole genome sequencing of 24 adaptors as well as the parent

2021-04-29 | E-MTAB-10354 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data