Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole Genome Bisulfite Sequencing (WGBS) or zebrafish, medaka, and zebrafish-medaka hybrid embryos

ABSTRACT: Whole Genome Bisulfite Sequencing (WGBS) or zebrafish, medaka, and zebrafish-medaka hybrid embryos

PROVIDER: PRJEB59047 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR10788125_1.fastq.gz	Fastqsanger.gz
	ERR10788125_2.fastq.gz	Fastqsanger.gz
	ERR10788126_1.fastq.gz	Fastqsanger.gz
	ERR10788126_2.fastq.gz	Fastqsanger.gz
	ERR10788127_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

Whole Genome Bisulfite Sequencing (WGBS) or zebrafish, medaka, and zebrafish-medaka hybrid embryos

Project description:During development, the inherited DNA methylation patterns from the parental gametes needs to be remodeled into a state compatible with embryonic pluripotency. In Zebrafish, this remodeling is achieved by the maternal methylome becoming hypomethylated to match the paternal methylome. However, how this is achieved in medaka (another teleost fish) is currently not known. Moreover, how DNA methylation remodeling is impacted in hybrid organisms, and the effects this may have on their development, is also not known. Here we address these questions by generation whole genome bisulfite sequencing data for zebrafish, medaka and zebrafish medaka embryos.

2023-08-25 | E-MTAB-12535 | biostudies-arrayexpress

Bisulfite sequencing of medaka egg methylomes

Project description:Medaka egg methylomes were sequenced using whole genome bisulfite sequencing (WGBS)

2024-11-01 | GSE160094 | GEO

Bisulfite sequencing of medaka PGCs methylomes

Project description:Medaka PGCs methylomes were sequenced using whole genome bisulfite sequencing (WGBS)

2019-12-25 | GSE130002 | GEO

Bisulfite sequencing of medaka sperm methylomes

Project description:Medaka sperm methylomes were sequenced using whole genome bisulfite sequencing (WGBS)

2019-04-23 | GSE128797 | GEO

Whole Genome Bisulfite Sequencing of Female Zebrafish Embryos Treated with Atrazine

Project description:We exposed zebrafish embryos to 0.3, 3, and 30 ppb (µg/L) of ATZ for 72 hours post fertilization. We performed whole-genome bisulfite sequencing (WGBS) to assess the effects of developmental ATZ exposure on DNA methylation in female fish brains

2020-01-24 | GSE144154 | GEO

Bisulfite sequencing of medaka

Project description:Bisulfite sequencing of medaka

| PRJNA671869 | ENA