Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole-genome resequencing of 90 tetrads of EMS-treated fission yeast Schizosaccharomyces pombe

ABSTRACT: Whole-genome resequencing of 90 tetrads of EMS-treated fission yeast Schizosaccharomyces pombe

PROVIDER: PRJEB59508 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR10829200_1.fastq.gz	Fastqsanger.gz
	ERR10829200_2.fastq.gz	Fastqsanger.gz
	ERR10829300_1.fastq.gz	Fastqsanger.gz
	ERR10829300_2.fastq.gz	Fastqsanger.gz
	ERR10829400_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 736

Similar Datasets

Whole-genome resequencing of 90 tetrads of EMS-treated fission yeast Schizosaccharomyces pombe

Project description:This experiment aims at analyzing crossover distribution genome-wise, in the fission yeast. S. pombe strains PR109 (h- leu1-32 ura4-D18) and PR110 (h+ leu1-32 ura4-D18) were used for three successive rounds of mutagenesis with Ethylmethane Sulfonate Mutagenesis. Five independent clones of the first round of mutagenesis were at the root of two subsequent similar rounds of mutagenesis. Each clone used was checked for its ability to mate and sporulate. Eventually, five mutagenized clones from each of the PR109 and PR110 backgrounds were sequenced to identify de novo mutations and determine the optimal combinations of mutation patterns for recombination analyses. The following h- x h+ crosses were selected and the corresponding tetrads dissected: BLP49 (A) x BLP23 (I), 29 tetrads; BLP59 (C) x BLP19 (H), 30 tetrads and BLP64 (D) x BLP33 (K), 33 tetrads.

2023-03-03 | E-MTAB-12516 | biostudies-arrayexpress

Whole-genome resequencing of wildtype and EMS-treated fission yeast Schizosaccharomyces pombe

Project description:Whole-genome resequencing of wildtype and EMS-treated fission yeast Schizosaccharomyces pombe

| PRJEB58989 | ENA

Proteasome regulation of petite-negativity in fission yeast

Project description:In this data set, fission yeast (Schizosaccharomyces pombe) are used to investigate petite-positive mutation ptp1-1 derived mitochondrial ubiquitin-dependent degradation.

2025-08-18 | MSV000098860 | MassIVE

The fission yeast Schizosaccharomyces pombe

Project description:The fission yeast Schizosaccharomyces pombe

| PRJNA413028 | ENA

Genome-wide map of RNA-Seq in fission yeast Schizosaccharomyces pombe

Project description:RNA-Seq from 3 different strains of fission yeast Schizosaccharomyces pombe.

2020-05-26 | GSE148191 | GEO

Genome wide map of H3K9me2 in fission yeast Schizosaccharomyces pombe.

Project description:Genome wide map of H3K9me2 in 4 different strains of fission yeast Schizosaccharomyces pombe.

2019-01-03 | GSE119604 | GEO

Genome wide map of heterochromatin state in fission yeast Schizosaccharomyces pombe

Project description:Genome wide map of heterochromatin state in fission yeast Schizosaccharomyces pombe via 4 different strains

2013-07-20 | GSE42848 | GEO

Whole-genome resequencing of wildtype and EMS-treated fission yeast Schizosaccharomyces pombe

2023-03-03 | E-MTAB-12514 | biostudies-arrayexpress

Inorganic polyphosphate abets silencing of a sub-telomeric gene cluster in fission yeast

Project description:This RNA-Seq analysis compares gene expression of the vtc4∆ mutant contrasting to the wild-type fission yeast (Schizosaccharomyces pombe).

2022-11-21 | GSE213524 | GEO

Factors governing the transcriptome changes and chronological lifespan of fission yeast during phosphate starvation II

Project description:This RNA-Seq analysis compares gene expression of the wild-type fission yeast (Schizosaccharomyces pombe) strain at various times after transfer to defined phosphate-replete ePMGT(+PO4) medium (2, 4, 8 HR) contrasting to the WT fission yeast S. pombe cells grown in phosphate-replete YES medium (0HR).

2024-01-27 | GSE247924 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data